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TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:9.3RPKM
FANTOM5:139.6Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Medium
 

Antibody staining

Antibody HPA017936

 

Antibody HPA018950

 

Antibody HPA018954

 

Glial cells

Medium   Not detected   Low  

Neuronal cells

Medium   High   High  
     
     
     

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

9.3

GTEx sample id

RPKM

5.59.112.12.120.602468101214161820
 
5.59.112.12.120.602468101214161820

Brain - Hippocampus

Brain - Hippocampus
RPKM: 9.3
Samples: 94

Max RPKM: 20.6
Min RPKM: 2.1
Std RPKM: 4.4
Median RPKM: 9.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 20.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 19.5
GTEX-X585-0011-R1B-SM-46MVE 18.1
GTEX-13JUV-0011-R1a-SM-5LZY4 17.5
GTEX-12WSE-0011-R1b-SM-5GU4V 17.3
GTEX-YFC4-0011-R1a-SM-4V6EH 16.5
GTEX-13FXS-0011-R1a-SM-5K7U6 16.4
GTEX-T6MN-0011-R1A-SM-32QOY 15.9
GTEX-13O3O-0011-R1b-SM-5KM2K 15.9
GTEX-PVOW-0011-R1A-SM-32PL6 15.6
GTEX-139TT-0011-R1a-SM-5LZVD 15.1
GTEX-RNOR-0011-R1A-SM-5SI8F 15.0
GTEX-N7MS-0011-R1a-SM-2HMJG 14.9
GTEX-WWYW-0011-R1A-SM-3TW8G 14.6
GTEX-P44H-0011-R1A-SM-3NM8J 14.4
GTEX-12WSF-0011-R1a-SM-5DUVI 14.3
GTEX-144GL-0011-R1a-SM-5PNZ5 14.2
GTEX-131XH-0011-R1a-SM-5DUWA 14.1
GTEX-13NYS-0011-R1b-SM-5MR55 13.6
GTEX-WL46-0011-R1A-SM-3LK6M 12.6
GTEX-13N1W-0011-R1b-SM-5MR4T 12.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 12.3
GTEX-13X6I-0011-R1b-SM-5PNZC 12.3
GTEX-XOTO-0011-R1B-SM-4B65C 12.2
GTEX-145MH-0011-R1b-SM-5PNWY 12.0
GTEX-T5JC-0011-R1A-SM-32PM6 12.0
GTEX-QDT8-0011-R1A-SM-32PKS 11.8
GTEX-13N2G-0011-R1b-SM-5MR3G 11.7
GTEX-13OW5-0011-R1b-SM-5L3GE 11.6
GTEX-1313W-0011-R1b-SM-5EQ4A 11.5
GTEX-13G51-0011-R1a-SM-5LZYR 11.4
GTEX-13OW6-0011-R1a-SM-5L3HQ 11.2
GTEX-R55E-0011-R1A-SM-2TC6N 11.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 10.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 10.8
GTEX-14ASI-0011-R1b-SM-5S2TY 10.7
GTEX-12WSM-0011-R1a-SM-5LZW6 10.6
GTEX-WZTO-0011-R1B-SM-3NMAR 10.6
GTEX-13PDP-0011-R1a-SM-5PNX5 10.6
GTEX-13FLW-0011-R1b-SM-5LZX2 10.6
GTEX-ZAB4-0011-R1a-SM-4RGNO 10.4
GTEX-12WSH-0011-R1a-SM-5GU5V 10.2
GTEX-N7MT-0011-R1a-SM-5SI7S 10.0
GTEX-QVUS-0011-R1A-SM-3GAD2 9.8
GTEX-TSE9-0011-R1A-SM-3DB7E 9.6
GTEX-13NYB-0011-R1b-SM-5KM4F 9.6
GTEX-QMR6-0011-R1A-SM-32PKW 9.2
GTEX-QVJO-0011-R1A-SM-2S1QI 9.0
GTEX-S7SE-0011-R1A-SM-2XCDE 9.0
GTEX-13112-0011-R1b-SM-5HL7K 8.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 8.7
GTEX-12WSD-0011-R1b-SM-5LZVY 8.4
GTEX-ZUA1-0011-R1a-SM-4YCE2 8.3
GTEX-UTHO-0011-R1A-SM-3GIJO 8.3
GTEX-X4XX-0011-R1B-SM-3P622 8.1
GTEX-NPJ7-0011-R1a-SM-3GACT 7.6
GTEX-131YS-0011-R1a-SM-5DUXC 7.5
GTEX-13S7M-0011-R1b-SM-5PNZE 7.5
GTEX-13OW7-0011-R1b-SM-5L3HF 6.9
GTEX-145LS-0011-R1b-SM-5PNUP 6.6
GTEX-NPJ8-0011-R1a-SM-33HCB 6.4
GTEX-WVLH-0011-R1A-SM-4MVOK 6.2
GTEX-XMD1-0011-R1A-SM-4AT4C 6.2
GTEX-13FHO-0011-R1b-SM-5KLZG 6.2
GTEX-1399T-0011-R1b-SM-5DUWN 6.1
GTEX-11GSO-0011-R1b-SM-57WD3 6.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 6.1
GTEX-13OVL-0011-R1a-SM-5L3H5 5.9
GTEX-PWO3-0011-R1A-SM-2I5EW 5.7
GTEX-132Q8-0011-R1a-SM-5EGLK 5.6
GTEX-NL3H-0011-R1a-SM-48TDJ 5.5
GTEX-13QJC-0011-R1b-SM-5S2UU 5.4
GTEX-11UD1-0011-R1b-SM-5BC7D 5.4
GTEX-11ONC-0011-R1a-SM-57WD4 5.4
GTEX-13RTL-0011-R1a-SM-5PNZ8 5.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 5.3
GTEX-13SLW-0011-R1a-SM-5S2W7 5.3
GTEX-13JVG-0011-R1a-SM-5KM32 4.9
GTEX-11ZTS-0011-R1a-SM-5BC71 4.5
GTEX-1212Z-0011-R1b-SM-5BC72 4.5
GTEX-12WSB-0011-R1b-SM-5P9EY 4.3
GTEX-13OW8-0011-R1a-SM-5L3HI 4.0
GTEX-139T8-0011-R1a-SM-5HL75 4.0
GTEX-11ZVC-0011-R1b-SM-5BC6M 3.9
GTEX-145LU-0011-R1a-SM-5Q5CE 3.8
GTEX-ZF28-0011-R1a-SM-4WWD1 3.8
GTEX-13NZA-0011-R1b-SM-5LUAF 3.7
GTEX-13CF2-0011-R1a-SM-5LZY1 3.2
GTEX-YJ89-0011-R1a-SM-4RGLS 3.1
GTEX-ZVZQ-0011-R1a-SM-57WBU 3.0
GTEX-144GO-0011-R1a-SM-5PNWO 3.0
GTEX-13FTY-0011-R1a-SM-5LZXE 2.6
GTEX-13FHP-0011-R1b-SM-5K7XL 2.5
GTEX-ZE7O-0011-R1a-SM-57WDM 2.1
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

139.6

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 139.6
FF:10169-103B7 60 years, female 167.4
FF:10374-105G5 89 years, female 135.9
FF:10153-102I9 76 years, female 115.5

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