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TISSUE ATLAS PRIMARY DATA KIDNEY

GENE/PROTEIN

Antibody validation


Dictionary

Kidney

Tissue proteome

Kidney

KIDNEY - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:16.7TPM
GTEx:12.6RPKM
FANTOM5:52.5Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:Low
Cells in tubules:Low
 

Antibody staining

Antibody HPA008965

 

Antibody CAB009445

 

Cells in glomeruli

Low   Not detected  

Cells in tubules

Low   Low  
   
   
   

KIDNEY - HPA RNA-seq

Average TPM

16.7

overview Female, age 58
Sample 1
TPM: 20.4
Cell types%
Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15
overview Female, age 67
Sample 2
TPM: 16.2
Cell types%
Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 55
Sample 3
TPM: 34.4
Cell types%
Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5
overview Male, age 46
Sample 4
TPM: 22.7
Cell types%
Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10
overview Female, age 57
Sample 5
TPM: 6.7
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 6
TPM: 11.4
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20
overview Male, age 73
Sample 7
TPM: 10.6
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Female, age 59
Sample 8
TPM: 15.5
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15
overview Female, age 48
Sample 9
TPM: 12.4
Cell types%
Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM

12.6

GTEx sample id

RPKM

7.712.117.23.326.402468101214161820222426
 
7.712.117.23.326.402468101214161820222426

Kidney - Cortex

Kidney - Cortex
RPKM: 12.6
Samples: 32

Max RPKM: 26.4
Min RPKM: 3.3
Std RPKM: 5.7
Median RPKM: 12
GTEX-11TTK-1926-SM-5PNW8 26.4
GTEX-1399S-0526-SM-5IJG8 22.4
GTEX-ZVZP-0926-SM-5GIDB 22.0
GTEX-13RTJ-2226-SM-5S2Q1 20.6
GTEX-12696-0926-SM-5FQTV 18.9
GTEX-13O1R-2526-SM-5N9FW 18.8
GTEX-ZYT6-2226-SM-5GIC9 17.2
GTEX-NPJ8-2226-SM-3TW8D 17.2
GTEX-ZLFU-0926-SM-5P9F8 17.2
GTEX-13112-2126-SM-5GCO4 17.1
GTEX-13OVI-1126-SM-5KLZF 16.7
GTEX-145MN-0326-SM-5QGQI 13.6
GTEX-RN64-1626-SM-48FD7 13.5
GTEX-147F4-2626-SM-5Q5CS 12.9
GTEX-ZYFD-1526-SM-5NQ7T 12.6
GTEX-13OVL-1826-SM-5KLZR 12.4
GTEX-11GS4-2326-SM-5A5KS 11.7
GTEX-N7MS-1626-SM-3LK5F 11.0
GTEX-QLQW-1626-SM-4R1K1 10.5
GTEX-ZYFG-1626-SM-5GZYY 9.6
GTEX-XPVG-0526-SM-4B65N 9.5
GTEX-ZC5H-1726-SM-5HL7X 9.2
GTEX-UPIC-1126-SM-4IHLO 8.7
GTEX-QDVN-1626-SM-48TZC 7.8
GTEX-12WSG-0826-SM-5EQ5A 7.2
GTEX-1497J-0826-SM-5NQAJ 6.7
GTEX-T5JC-1526-SM-4DM68 6.7
GTEX-11OF3-1326-SM-5N9FJ 6.4
GTEX-P4QS-1126-SM-3NMD5 6.3
GTEX-13NYB-1726-SM-5N9G2 5.3
GTEX-13OW6-1826-SM-5N9F9 4.9
GTEX-Y5V6-2026-SM-5IFHO 3.3
Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million

52.5

FANTOM5 sample id

Sample description

Tags Per Million

Kidney
Tags Per Million: 52.5
FF:10017-101C8 60,62,63 years, female 52.5

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