Tissue expression of GCHFR - Staining in colon

COLON - Expression summary

Protein expression

RNA expression

HPA:	12.8	TPM
GTEx:	5.7	RPKM
FANTOM5:	38.7	Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Low
Glandular cells:	Low
Peripheral nerve/ganglion:	Not detected

Antibody staining	Antibody HPA046258
Endothelial cells	Low
Glandular cells	Low
Peripheral nerve/ganglion	Not detected

COLON - HPA RNA-seq

Average TPM	12.8

Male, age 54

Sample 1
TPM: 20.7

Cell types%

Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25

Female, age 57

Sample 2
TPM: 13.5

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 80

Sample 3
TPM: 17.0

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 68

Sample 4
TPM: 17.8

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 68

Sample 5
TPM: 8.3

Cell types%

Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70

Female, age 61

Sample 6
TPM: 12.1

Cell types%

Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30

Male, age 80

Sample 7
TPM: 10.0

Cell types%

Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

Female, age 78

Sample 8
TPM: 5.8

Cell types%

Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50

Male, age 84

Sample 9
TPM: 8.1

Cell types%

Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35

Male, age 80

Sample 10
TPM: 16.3

Cell types%

Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45

Female, age 78

Sample 11
TPM: 10.8

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 69

Sample 12
TPM: 15.2

Cell types%

Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45

Female, age 72

Sample 13
TPM: 10.8

Cell types%

Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM	5.7

GTEx sample id

RPKM

Colon - Sigmoid

Colon - Sigmoid
RPKM: 3.3

Samples: 149

Max RPKM: 6.3
Min RPKM: 0.8
Std RPKM: 1
Median RPKM: 3.2

GTEX-V955-1726-SM-4JBHF

6.3

GTEX-13X6I-2726-SM-5Q5ET

6.2

GTEX-14A5I-2426-SM-5Q5CP

6.2

GTEX-13FHO-2726-SM-5K7VG

5.9

GTEX-1477Z-2126-SM-5Q5CM

5.9

GTEX-13X6K-2726-SM-5O9DG

5.5

GTEX-13OVJ-1826-SM-5KM2D

5.3

GTEX-139D8-2926-SM-5IJBM

5.2

Show all

Colon - Transverse

Colon - Transverse
RPKM: 7.6

Samples: 196

Max RPKM: 26.1
Min RPKM: 1.5
Std RPKM: 3.9
Median RPKM: 7.1

GTEX-XV7Q-2126-SM-4BRVX

26.1

GTEX-1399R-2226-SM-5P9JB

19.1

GTEX-XMK1-1726-SM-4B64Z

18.6

GTEX-13W3W-2126-SM-5K7UX

17.7

GTEX-131XE-0826-SM-5HL9W

15.5

GTEX-PWOO-1326-SM-48TCJ

15.4

GTEX-T5JW-1126-SM-4DM5V

15.1

GTEX-1128S-1626-SM-5H12O

14.8

Show all

COLON - FANTOM5 CAGE

Average Tags Per Million	38.7

FANTOM5 sample id

Sample description

Tags Per Million

Colon
Tags Per Million: 38.7

FF:10014-101C5

62,83,84 years, mixed

38.7