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SS18

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:30.2TPM
GTEx:14.7RPKM
FANTOM5:84.5Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA055741

  

Antibody HPA059539

  

Adipocytes

 Not detected   Low  

Chondrocytes

 Not detected   Medium  

Fibroblasts

 Not detected   Medium  

Peripheral nerve

 Not detected   Low  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Low
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA055741

  

Antibody HPA059539

  

Adipocytes

 Not detected   Medium  

Fibroblasts

 Low   Medium  

Peripheral nerve

 Not detected   Medium  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

30.2
N/A Female, age 80
Sample 1
TPM: 28.5
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 21.6
N/A Female, age 57
Sample 3
TPM: 22.8
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 42.2
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 35.8
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

14.7

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 15.0
Samples: 350

Max RPKM: 21
Min RPKM: 7.5
Std RPKM: 1.9
Median RPKM: 15
GTEX-P44H-0326-SM-2XCES 21.0
GTEX-QEL4-0326-SM-3GAE5 19.8
GTEX-WEY5-1926-SM-3GIL8 19.8
GTEX-S341-1626-SM-3K2B8 19.6
GTEX-12WSB-0226-SM-5GCOR 19.5
GTEX-T8EM-1126-SM-3DB7D 19.4
GTEX-131XF-2226-SM-5EQKG 19.3
GTEX-RM2N-1726-SM-2TF55 19.3
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 14.3
Samples: 227

Max RPKM: 19.8
Min RPKM: 7.1
Std RPKM: 2
Median RPKM: 14.1
GTEX-13JUV-0626-SM-5J1MQ 19.8
GTEX-11NV4-1426-SM-5BC4W 19.5
GTEX-UPK5-1826-SM-3GAEB 19.3
GTEX-ZDXO-2326-SM-5LU9W 18.8
GTEX-WFJO-1026-SM-3GIKL 18.7
GTEX-1399T-1326-SM-5PNVH 18.6
GTEX-11ZTS-1326-SM-5EQMA 18.4
GTEX-13N11-1826-SM-5IJDS 18.4
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

84.5

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 84.5
FF:10010-101C1 65,65,76 years, mixed 84.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.