Tissue expression of SS18 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	30.6	TPM
GTEx:	14.9	RPKM
FANTOM5:	85.1	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Low

Antibody staining	Antibody HPA055741	Antibody HPA059539
Squamous epithelial cells	Low	High

ESOPHAGUS - HPA RNA-seq

Average TPM	30.6

Female, age 70

Sample 1
TPM: 24.7

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 32.5

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 34.8

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	14.9

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 14.9

Samples: 286

Max RPKM: 22.1
Min RPKM: 7
Std RPKM: 2.7
Median RPKM: 15.1

GTEX-11DYG-1326-SM-5N9DO

22.1

GTEX-RU72-0726-SM-46MUW

21.0

GTEX-146FQ-1026-SM-5LU8I

20.5

GTEX-131XF-0826-SM-5GICG

20.2

GTEX-12KS4-0926-SM-5BC5S

20.1

GTEX-ZT9X-0526-SM-5GCOP

20.0

GTEX-ZVE2-1326-SM-5NQ94

19.9

GTEX-1399U-1026-SM-5J1OC

19.8

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	85.1

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 85.1

FF:10015-101C6

68,74,75 years, mixed

85.1