Tissue expression of RPRD1A - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	25.7	TPM
GTEx:	7.8	RPKM
FANTOM5:	40.9	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Low
Chondrocytes:	High
Fibroblasts:	Medium
Peripheral nerve:	Medium

Antibody staining	Antibody HPA040602
Adipocytes	Not detected
Chondrocytes	High
Fibroblasts	Medium
Peripheral nerve	Medium

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Medium
Fibroblasts:	Medium

Antibody staining	Antibody HPA040602
Adipocytes	Medium
Fibroblasts	Medium

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	25.7

Female, age 80

Sample 1
TPM: 24.3

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 31.0

Female, age 57

Sample 3
TPM: 25.4

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 27.5

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 20.1

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	7.8

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 8.1

Samples: 350

Max RPKM: 12.6
Min RPKM: 4.3
Std RPKM: 1.3
Median RPKM: 7.9

GTEX-O5YT-0226-SM-32PK5

12.6

GTEX-SNMC-1326-SM-2XCFK

12.3

GTEX-ZDTT-2626-SM-5S2OP

12.0

GTEX-POYW-0726-SM-2XCEO

11.9

GTEX-S33H-1126-SM-2XCB6

11.7

GTEX-S3XE-1626-SM-3K2AJ

11.5

GTEX-OIZI-0226-SM-2XCEE

11.3

GTEX-NFK9-0326-SM-3MJGV

11.2

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Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 7.4

Samples: 227

Max RPKM: 12.7
Min RPKM: 3.6
Std RPKM: 1.7
Median RPKM: 7.1

GTEX-VUSG-1426-SM-3GIJN

12.7

GTEX-11WQK-1526-SM-5EGKN

12.6

GTEX-13IVO-2426-SM-5K7V9

11.7

GTEX-13NYS-0726-SM-5J1OR

11.5

GTEX-145MI-0826-SM-5SI95

11.4

GTEX-12ZZX-1726-SM-5BC63

11.1

GTEX-14A6H-1026-SM-5SIAZ

11.1

GTEX-13PDP-1226-SM-5K7TW

10.9

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	40.9

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 40.9

FF:10010-101C1

65,65,76 years, mixed

40.9