Fields »
ABOUT
HELP
BLOG
NT5C3B

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:14.9TPM
GTEx:16.3RPKM
FANTOM5:24.3Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Medium
Peripheral nerve:Not detected
Chondrocytes:Not available
 
 
 

Antibody staining

Antibody HPA030786

  

Antibody HPA057095

  

Adipocytes

 Not detected  

Fibroblasts

 Medium   Not detected  

Peripheral nerve

 Not detected  

Chondrocytes

 Not detected  
      
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Medium
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA030786

  

Antibody HPA057095

  

Adipocytes

 Not detected   Not detected  

Chondrocytes

 Not detected  

Fibroblasts

 Medium   Not detected  

Peripheral nerve

 Not detected   Not detected  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

14.9
N/A Female, age 80
Sample 1
TPM: 10.4
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 11.8
N/A Female, age 57
Sample 3
TPM: 9.0
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 30.8
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 12.3
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

16.3

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 16.8
Samples: 350

Max RPKM: 32.2
Min RPKM: 8.9
Std RPKM: 4
Median RPKM: 16.1
GTEX-Y8LW-1926-SM-4WWFZ 32.2
GTEX-UTHO-0426-SM-5SI7N 29.7
GTEX-ZP4G-2326-SM-57WEM 28.9
GTEX-13OVI-1326-SM-5IJBO 28.7
GTEX-139YR-2426-SM-5J1OB 28.5
GTEX-1399U-2426-SM-5K7XB 28.3
GTEX-Y5V6-2526-SM-5IFJV 28.3
GTEX-X5EB-2426-SM-4E3HX 27.8
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 15.5
Samples: 227

Max RPKM: 29.9
Min RPKM: 7.3
Std RPKM: 4
Median RPKM: 15
GTEX-X585-2526-SM-4QAS1 29.9
GTEX-YJ89-1926-SM-5IFJ6 28.4
GTEX-11GSO-0226-SM-5A5LV 27.2
GTEX-ZYVF-1026-SM-5E44V 26.0
GTEX-131YS-1726-SM-5HL7G 25.2
GTEX-12BJ1-0826-SM-5EQ5P 24.4
GTEX-XUZC-1126-SM-4BOPZ 24.4
GTEX-13NYS-0726-SM-5J1OR 23.4
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

24.3

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 24.3
FF:10010-101C1 65,65,76 years, mixed 24.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.