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NT5C3B
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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:29.4RPKM
FANTOM5:82.8Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Low
 

Antibody staining

Antibody HPA030786

 

Antibody HPA057095

 

Glial cells

Not detected   Not detected  

Neuronal cells

Low   Not detected  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

29.4

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 29.4
Samples: 117

Max RPKM: 50.6
Min RPKM: 8
Std RPKM: 10.2
Median RPKM: 30.1
GTEX-11OF3-0011-R5a-SM-57WB4 50.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50.2
GTEX-12WSC-0011-R5b-SM-5CVNS 48.4
GTEX-X585-0011-R5A-SM-46MVI 47.8
GTEX-ZUA1-0011-R5b-SM-51MTG 47.6
GTEX-131YS-0011-R5b-SM-5K7YB 47.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 47.0
GTEX-14BIM-0011-R5b-SM-5S2RM 44.9
GTEX-T5JC-0011-R5A-SM-32PLK 44.3
GTEX-1313W-0011-R5b-SM-5L3EP 44.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 43.8
GTEX-139TT-0011-R5b-SM-5K7W8 42.8
GTEX-T6MN-0011-R5A-SM-32QPD 42.4
GTEX-145MH-0011-R5a-SM-5P9JT 41.9
GTEX-T2IS-0011-R5A-SM-32QP4 41.9
GTEX-1399T-0011-R5b-SM-5IJDK 41.8
GTEX-13G51-0011-R5a-SM-5L3EB 41.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 41.1
GTEX-13X6J-0011-R5b-SM-5PNWT 41.1
GTEX-QVJO-0011-R5A-SM-2S1QM 41.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 40.3
GTEX-13NYB-0011-R5a-SM-5MR45 39.3
GTEX-R55E-0011-R5A-SM-2TC5N 39.1
GTEX-UTHO-0011-R5A-SM-3GIJD 39.1
GTEX-11NV4-0011-R5a-SM-5NQ88 38.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 38.6
GTEX-13FLW-0011-R5a-SM-5LZX6 36.5
GTEX-11H98-0011-R5b-SM-57WCF 35.9
GTEX-13JUV-0011-R5a-SM-5LZY5 35.8
GTEX-P44H-0011-R5A-SM-2XCEX 35.7
GTEX-WZTO-0011-R5B-SM-3NMC5 35.4
GTEX-14ABY-0011-R5b-SM-5SI7B 35.1
GTEX-S7SE-0011-R5A-SM-2XCDA 35.1
GTEX-13SLX-0011-R5a-SM-5O9BV 34.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 34.6
GTEX-13OVH-0011-R5b-SM-5KM4L 34.6
GTEX-WHSE-0011-R5A-SM-3P5ZO 34.5
GTEX-Z93S-0011-R5b-SM-4RGNI 34.4
GTEX-13NYS-0011-R5a-SM-5MR4D 34.0
GTEX-13X6K-0011-R5b-SM-5PNUE 34.0
GTEX-WVLH-0011-R5A-SM-3MJFW 33.9
GTEX-13CZV-0011-R5a-SM-5K7XA 33.5
GTEX-12WSF-0011-R5a-SM-5HL8K 33.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 33.2
GTEX-13VXU-0011-R5a-SM-5O9D7 33.2
GTEX-N7MS-0011-R5a-SM-2HMK8 32.9
GTEX-N7MT-0011-R5a-SM-2I3G6 32.9
GTEX-13OW5-0011-R5b-SM-5L3FR 32.2
GTEX-11GSP-0011-R5a-SM-57WBE 32.0
GTEX-13OW7-0011-R5b-SM-5O9DM 31.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 31.7
GTEX-RU72-0011-R5A-SM-2TF6U 31.5
GTEX-132Q8-0011-R5a-SM-5IJDM 31.3
GTEX-WL46-0011-R5A-SM-3LK6V 30.9
GTEX-13O3O-0011-R5b-SM-5KM44 30.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 30.5
GTEX-12WSD-0011-R5b-SM-5CVNG 30.1
GTEX-145LS-0011-R5a-SM-5SI65 30.1
GTEX-WWYW-0011-R5A-SM-3NB3E 30.1
GTEX-TSE9-0011-R5A-SM-3DB7J 30.0
GTEX-13OVL-0011-R5b-SM-5L3FU 29.8
GTEX-13OW6-0011-R5a-SM-5O9BK 28.9
GTEX-ZE7O-0011-R5a-SM-57WBO 28.9
GTEX-XOTO-0011-R5A-SM-4B657 28.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 28.3
GTEX-13S7M-0011-R5b-SM-5P9HS 27.7
GTEX-13FLV-0011-R5a-SM-5LZWT 27.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 26.3
GTEX-12ZZX-0011-R5a-SM-5HL89 25.9
GTEX-PVOW-0011-R5A-SM-32PL7 25.7
GTEX-13X6I-0011-R5a-SM-5PNWW 25.1
GTEX-12WSB-0011-R5b-SM-5GU67 24.9
GTEX-NL4W-0011-R5a-SM-2I3GD 24.6
GTEX-X4XX-0011-R5A-SM-46MWN 24.4
GTEX-OHPN-0011-R5A-SM-2I5FF 24.2
GTEX-14BIN-0011-R5b-SM-5SI78 23.9
GTEX-13JVG-0011-R5a-SM-5MR4O 23.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 23.8
GTEX-RVPV-0011-R5A-SM-2TF69 23.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 23.1
GTEX-12WSA-0011-R5b-SM-5GU5I 23.0
GTEX-YFC4-0011-R5a-SM-4RGLR 22.9
GTEX-13CIG-0011-R5b-SM-5L3F2 22.6
GTEX-NL3H-0011-R5a-SM-2I3GB 22.5
GTEX-11WQC-0011-R5a-SM-5BC74 22.1
GTEX-144GO-0011-R5a-SM-5PNUR 22.1
GTEX-RVPU-0011-R5A-SM-2XCAD 22.1
GTEX-XMD1-0011-R5A-SM-4AT47 22.1
GTEX-YJ89-0011-R5a-SM-4V6GM 22.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 22.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 21.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 21.5
GTEX-ZXG5-0011-R5b-SM-57WBN 21.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 21.0
GTEX-NPJ7-0011-R5a-SM-33HBK 19.3
GTEX-X261-0011-R5A-SM-3NMB4 18.7
GTEX-139T8-0011-R5b-SM-5J1MO 18.5
GTEX-OXRN-0011-R5A-SM-2I5EF 17.0
GTEX-ZV68-0011-R5a-SM-4YCDW 16.9
GTEX-13FHP-0011-R5b-SM-5LZY2 16.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 16.5
GTEX-QMR6-0011-R5A-SM-32PKT 15.8
GTEX-139TS-0011-R5b-SM-5J2MZ 15.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 15.1
GTEX-144GL-0011-R5b-SM-5PNUJ 15.1
GTEX-13112-0011-R5b-SM-5DUV8 14.5
GTEX-12WSH-0011-R5b-SM-5P9F3 14.3
GTEX-ZVT3-0011-R5a-SM-51MSI 13.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 13.4
GTEX-1445S-0011-R5a-SM-5PNUS 13.2
GTEX-11UD1-0011-R5b-SM-5P9FP 12.4
GTEX-145MG-0011-R5b-SM-5S2VU 11.1
GTEX-S7PM-0011-R5A-SM-3NM8G 10.5
GTEX-13CF2-0011-R5a-SM-5LZWS 10.1
GTEX-1477Z-0011-R5b-SM-5PNUO 9.9
GTEX-13NZA-0011-R5b-SM-5KM4K 8.0
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

82.8

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 82.8
FF:10379-105H1 89 years, female 83.2
FF:10164-103B2 76 years, female 82.4

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