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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:38.3TPM
GTEx:28.3RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Not detected
Neuropil:Medium
 

Antibody staining

Antibody HPA030786

 

Antibody HPA057095

 

Endothelial cells

Not detected   Not detected  

Glial cells

Not detected   Not detected  

Neuronal cells

Not detected   Not detected  

Neuropil

Medium   Not detected  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

38.3

N/A Male, age 5
Sample 1
TPM: 19.3
overview Female, age 40
Sample 2
TPM: 46.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 49.3
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

28.3

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 28.9
Samples: 114

Max RPKM: 40.8
Min RPKM: 15.4
Std RPKM: 6
Median RPKM: 29.4
GTEX-13FXS-3126-SM-5J2NN 40.8
GTEX-X4XX-3026-SM-3NMB2 40.8
GTEX-12126-1026-SM-5P9JJ 39.4
GTEX-11GSO-2926-SM-5HL73 38.8
GTEX-13OVH-3026-SM-5MR4N 38.6
GTEX-12ZZX-2926-SM-5GCOQ 38.5
GTEX-T2IS-3026-SM-32QPM 38.5
GTEX-12WSC-3026-SM-5GCNF 38.2
GTEX-T5JC-2426-SM-3NMDB 38.2
GTEX-Z93S-2926-SM-57WB9 38.1
GTEX-12ZZZ-3026-SM-5BC67 37.6
GTEX-YJ89-3026-SM-5IFJI 36.6
GTEX-WVLH-3026-SM-3MJG9 36.2
GTEX-13NYB-3026-SM-5IJD7 36.1
GTEX-11ZUS-2926-SM-5FQSL 35.7
GTEX-131YS-3126-SM-5KLYT 35.4
GTEX-117XS-3026-SM-5N9CA 35.3
GTEX-X585-3026-SM-46MWF 35.2
GTEX-QVJO-1426-SM-2S1QY 34.9
GTEX-ZE7O-3126-SM-5HL5X 34.5
GTEX-13SLX-3126-SM-5S2Q5 34.4
GTEX-14BMV-3026-SM-5S2PQ 33.9
GTEX-13FLW-1426-SM-5K7YE 33.7
GTEX-ZAK1-3026-SM-5S2MJ 33.7
GTEX-145MG-3026-SM-5RQJA 33.5
GTEX-Y111-2726-SM-4TT3N 33.5
GTEX-13PL6-3126-SM-5LUAR 33.4
GTEX-Q2AG-2926-SM-2HMJ3 33.2
GTEX-13O3Q-2926-SM-5KM45 33.1
GTEX-ZYFD-3026-SM-5E44C 33.1
GTEX-T6MN-2626-SM-32PMQ 33.0
GTEX-XOTO-3026-SM-4B65M 32.9
GTEX-13OW6-3026-SM-5J2MI 32.8
GTEX-14ASI-3026-SM-5S2PN 32.8
GTEX-1313W-3126-SM-5LZUI 32.5
GTEX-RNOR-2326-SM-2TF4I 32.3
GTEX-WL46-2926-SM-3LK82 32.3
GTEX-WZTO-2926-SM-3NM9I 32.2
GTEX-13VXU-2926-SM-5LU5C 32.0
GTEX-1192X-3126-SM-5N9BY 31.9
GTEX-WHSE-3026-SM-3P5ZH 31.9
GTEX-11OF3-2926-SM-5HL78 31.7
GTEX-WWYW-3126-SM-3NB39 31.3
GTEX-Y8DK-0826-SM-4TT3T 31.3
GTEX-145MF-2726-SM-5O995 31.2
GTEX-13QIC-2926-SM-5J2NF 30.9
GTEX-11DXY-3226-SM-5GIDE 30.8
GTEX-ZUA1-3026-SM-59HJC 30.8
GTEX-13OW8-2826-SM-5L3GC 30.7
GTEX-11OC5-0726-SM-5P9JK 30.6
GTEX-R55F-1326-SM-5S2V4 30.4
GTEX-11DXW-1126-SM-5H12Q 30.2
GTEX-13O3O-3126-SM-5KM3H 30.2
GTEX-PVOW-2526-SM-2XCF7 30.1
GTEX-1117F-3226-SM-5N9CT 29.9
GTEX-145MH-3026-SM-5Q5DZ 29.9
GTEX-11ONC-2926-SM-5P9JM 29.8
GTEX-11EI6-3026-SM-5GZZO 29.1
GTEX-11PRG-2926-SM-5987A 28.9
GTEX-UTHO-3026-SM-3GAFB 28.9
GTEX-13NYS-3126-SM-5KLYV 28.7
GTEX-XLM4-3026-SM-4AT6L 28.5
GTEX-13X6J-3026-SM-5Q5CU 28.3
GTEX-145LS-3126-SM-5Q5BY 28.2
GTEX-1399T-3026-SM-5KLZC 28.1
GTEX-ZVT3-3026-SM-5E43N 28.0
GTEX-1128S-2726-SM-5H12C 27.9
GTEX-11GS4-3126-SM-5A5LH 27.8
GTEX-ZAJG-3126-SM-5HL9J 27.8
GTEX-11NUK-2926-SM-5A5MD 27.7
GTEX-13FHO-3026-SM-5J1O9 27.5
GTEX-QVUS-2826-SM-3GADB 27.3
GTEX-14A5I-2926-SM-5Q5CQ 27.1
GTEX-12ZZY-3026-SM-5GCOU 26.9
GTEX-YFC4-3126-SM-5PNV6 26.7
GTEX-13S7M-3126-SM-5RQJQ 26.5
GTEX-11NV4-2126-SM-5N9DS 26.0
GTEX-12WSH-3026-SM-5CVNI 25.8
GTEX-13NYC-2826-SM-5K7WR 25.8
GTEX-13FHP-3026-SM-5IJBS 25.6
GTEX-TSE9-3026-SM-3DB76 25.6
GTEX-131XW-3126-SM-5LZUC 25.5
GTEX-144FL-3026-SM-5O99C 25.5
GTEX-ZZPT-3026-SM-5GZXH 25.5
GTEX-13OW7-3026-SM-5L3GY 25.3
GTEX-RU72-3026-SM-5SI7Y 25.3
GTEX-13JUV-2926-SM-5LZX7 25.2
GTEX-144GL-3026-SM-5Q5CW 24.9
GTEX-13JVG-3126-SM-5L3FH 24.7
GTEX-NPJ8-1526-SM-2D7VU 24.5
GTEX-11EMC-3226-SM-5EGKW 24.2
GTEX-12ZZW-2926-SM-5LZUP 24.1
GTEX-NPJ7-2726-SM-2I3FT 23.9
GTEX-12WSD-3126-SM-5HL7P 23.6
GTEX-132Q8-3026-SM-5PNVG 23.3
GTEX-111FC-3126-SM-5GZZ2 23.2
GTEX-11O72-2926-SM-5BC4V 23.0
GTEX-QMR6-1426-SM-32PLA 22.6
GTEX-147GR-3026-SM-5S2ML 22.0
GTEX-OXRN-2426-SM-2I5EQ 22.0
GTEX-QDT8-2926-SM-32PKC 21.6
GTEX-139T8-1026-SM-5J2MC 20.9
GTEX-N7MT-1126-SM-5SI7V 20.4
GTEX-13X6K-2926-SM-5Q5D5 19.8
GTEX-11WQK-3026-SM-5EQL6 19.1
GTEX-11GSP-3226-SM-5986O 17.8
GTEX-13OVJ-2826-SM-5L3GW 17.6
GTEX-PWO3-0926-SM-2I5EY 17.2
GTEX-13PVQ-3026-SM-5SI93 16.6
GTEX-13IVO-2926-SM-5L3CZ 16.5
GTEX-1445S-3026-SM-5O9BR 16.1
GTEX-11TTK-2926-SM-5PNYP 16.0
GTEX-12WSA-2926-SM-5EQ4D 15.7
GTEX-13G51-3026-SM-5IJB8 15.4
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 27.7
Samples: 108

Max RPKM: 44.3
Min RPKM: 13.8
Std RPKM: 6.9
Median RPKM: 27.7
GTEX-12WSC-0011-R10a-SM-5GU57 44.3
GTEX-13FXS-0011-R10a-SM-5J2MA 44.3
GTEX-13OW7-0011-R10a-SM-5L3H3 40.3
GTEX-13O3O-0011-R10a-SM-5LUA9 39.8
GTEX-12ZZX-0011-R10b-SM-5DUWK 38.9
GTEX-12ZZY-0011-R10b-SM-5HL7W 38.9
GTEX-13NYS-0011-R10a-SM-5MR4S 38.5
GTEX-13SLX-0011-R10a-SM-5P9HV 38.1
GTEX-14BIN-0011-R10a-SM-5S2UA 38.1
GTEX-1313W-0011-R10b-SM-5DUXA 38.0
GTEX-12ZZZ-0011-R10a-SM-5P9HC 37.6
GTEX-X4XX-0011-R10B-SM-46MWO 37.3
GTEX-Z93S-0011-R10a-SM-4RGNM 35.5
GTEX-131YS-0011-R10b-SM-5EQ5N 35.4
GTEX-13NYB-0011-R10a-SM-5KM43 35.1
GTEX-13OW6-0011-R10a-SM-5L3HE 34.6
GTEX-NL3H-0011-R10A-SM-2I3E9 34.5
GTEX-12126-0011-R10b-SM-5BC6T 34.4
GTEX-13X6J-0011-R10b-SM-5PNWA 34.2
GTEX-12WSD-0011-R10b-SM-5GU79 34.0
GTEX-13O3Q-0011-R10b-SM-5KM39 34.0
GTEX-14ASI-0011-R10b-SM-5S2VZ 33.8
GTEX-12WSE-0011-R10b-SM-5P9JV 33.3
GTEX-X585-0011-R10A-SM-46MUY 32.9
GTEX-YJ89-0011-R10a-SM-4SOK9 32.9
GTEX-145MG-0011-R10a-SM-5PNWG 32.6
GTEX-147GR-0011-R10b-SM-5S2UM 32.6
GTEX-13QIC-0011-R10a-SM-5O9C7 32.5
GTEX-14BIL-0011-R10a-SM-5SI75 32.5
GTEX-13RTJ-0011-R10b-SM-5O9CW 32.0
GTEX-12WSM-0011-R10a-SM-5DUWV 31.9
GTEX-T6MN-0011-R10A-SM-32QP7 31.8
GTEX-13CZV-0011-R10b-SM-5LZYD 31.1
GTEX-Q2AG-0011-R10A-SM-2HMLA 31.1
GTEX-13N1W-0011-R10b-SM-5MR4H 31.0
GTEX-11H98-0011-R10b-SM-5NQ98 30.8
GTEX-139TS-0011-R10a-SM-5K7TU 30.7
GTEX-13S7M-0011-R10b-SM-5PNZB 30.7
GTEX-WZTO-0011-R10B-SM-4E3KB 30.5
GTEX-145MH-0011-R10b-SM-5PNUK 30.2
GTEX-T5JC-0011-R10A-SM-32PM2 29.9
GTEX-12WSF-0011-R10a-SM-5LZVH 29.7
GTEX-131XH-0011-R10a-SM-5EGLJ 29.7
GTEX-11WQC-0011-R10a-SM-57WCT 29.4
GTEX-XLM4-0011-R10A-SM-4AT5P 29.3
GTEX-N7MS-0011-R10A-SM-2HMJK 29.2
GTEX-Y8DK-0011-R10A-SM-4SOK1 29.2
GTEX-ZVZQ-0011-R10b-SM-51MRT 29.2
GTEX-N7MT-0011-R10A-SM-2I3E1 29.1
GTEX-S7SE-0011-R10A-SM-2XCDF 28.3
GTEX-WVLH-0011-R10A-SM-3MJFM 28.2
GTEX-13FLW-0011-R10b-SM-5LZZF 28.0
GTEX-ZAB4-0011-R10a-SM-4SOKH 27.9
GTEX-12WSH-0011-R10a-SM-5LZUS 27.7
GTEX-13JUV-0011-R10b-SM-5LZXR 27.6
GTEX-ZDXO-0011-R10a-SM-4WWD8 27.4
GTEX-13OVL-0011-R10a-SM-5L3GS 27.2
GTEX-WL46-0011-R10A-SM-3MJFQ 27.1
GTEX-YFC4-0011-R10a-SM-4SOK5 27.1
GTEX-11ZUS-0011-R10b-SM-5BC79 27.0
GTEX-13FTZ-0011-R10b-SM-5KLZS 27.0
GTEX-ZF28-0011-R10a-SM-4WWEH 27.0
GTEX-13QJC-0011-R10a-SM-5SI63 26.6
GTEX-WWYW-0011-R10A-SM-3NB35 26.4
GTEX-X4EP-0011-R10B-SM-4QASJ 26.4
GTEX-ZVT3-0011-R10b-SM-57WB6 26.3
GTEX-147F4-0011-R10b-SM-5S2WC 26.2
GTEX-ZUA1-0011-R10a-SM-51MT6 26.2
GTEX-132Q8-0011-R10b-SM-5DUWZ 26.0
GTEX-13FLV-0011-R10b-SM-5LZZ2 25.9
GTEX-P44H-0011-R10A-SM-2XCEK 25.9
GTEX-NPJ7-0011-R10A-SM-2I3E5 25.8
GTEX-13G51-0011-R10b-SM-5LZYF 25.5
GTEX-NPJ8-0011-R10A-SM-2YUMO 25.4
GTEX-13FHO-0011-R10b-SM-5J2MM 24.9
GTEX-13OW8-0011-R10a-SM-5L3H6 24.7
GTEX-13X6I-0011-R10a-SM-5PNWI 24.4
GTEX-13X6K-0011-R10a-SM-5P9JR 24.4
GTEX-QVJO-0011-R10A-SM-2S1QJ 24.4
GTEX-13SLW-0011-R10a-SM-5S2UI 24.2
GTEX-145LS-0011-R10a-SM-5PNUQ 23.9
GTEX-QVUS-0011-R10A-SM-3GIK3 22.7
GTEX-RVPU-0011-R10A-SM-2XCAH 22.7
GTEX-X261-0011-R10B-SM-4E3JT 22.5
GTEX-145LU-0011-R10a-SM-5PNWJ 22.2
GTEX-TSE9-0011-R10A-SM-3DB7O 22.1
GTEX-QMR6-0011-R10A-SM-32PKO 21.3
GTEX-NL4W-0011-R10A-SM-2I3DY 20.9
GTEX-12ZZW-0011-R10b-SM-5HL9X 20.0
GTEX-ZXG5-0011-R10a-SM-57WDD 19.9
GTEX-OXRN-0011-R10A-SM-2I5GC 19.5
GTEX-13JVG-0011-R10b-SM-5KM2P 19.4
GTEX-13N2G-0011-R10a-SM-5MR34 19.3
GTEX-11WQK-0011-R10a-SM-5BC6R 18.4
GTEX-11GSP-0011-R10a-SM-5NQ7J 18.3
GTEX-QDT8-0011-R10A-SM-32PKG 17.9
GTEX-1477Z-0011-R10b-SM-5S2RF 17.8
GTEX-13NZA-0011-R10b-SM-5KM54 17.7
GTEX-131XW-0011-R10a-SM-5DUVA 16.6
GTEX-12WSA-0011-R10b-SM-5P9ET 16.3
GTEX-XMD1-0011-R10A-SM-4AT4A 16.3
GTEX-13OVJ-0011-R10b-SM-5L3HT 16.2
GTEX-1445S-0011-R10a-SM-5PNWB 15.3
GTEX-ZE7O-0011-R10a-SM-57WAZ 15.1
GTEX-OXRO-0011-R10A-SM-2I5EH 14.7
GTEX-ZV68-0011-R10a-SM-51MT7 14.7
GTEX-14753-0011-R10b-SM-5S2WE 14.4
GTEX-13IVO-0011-R10a-SM-5LZY3 13.8
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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