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COL6A2

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:373.1TPM
GTEx:374.6RPKM
FANTOM5:505.0Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:High
Chondrocytes:Medium
Fibroblasts:High
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA007029

  

Antibody HPA030920

  

Antibody HPA038799

  

Adipocytes

 High   High   High  

Chondrocytes

 High   High  

Fibroblasts

 Medium   High   High  

Peripheral nerve

 Not detected  
        
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:High
Fibroblasts:High
Peripheral nerve:Low
 
 

Antibody staining

Antibody HPA007029

  

Antibody HPA030920

  

Antibody HPA038799

  

Adipocytes

 High   High   High  

Fibroblasts

 High   High   High  

Peripheral nerve

 Medium   Low   Low  
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

373.1
N/A Female, age 80
Sample 1
TPM: 530.3
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 286.6
N/A Female, age 57
Sample 3
TPM: 267.8
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 367.6
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 413.0
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

374.6

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 414.4
Samples: 350

Max RPKM: 1206.4
Min RPKM: 85.9
Std RPKM: 188.1
Median RPKM: 385.7
GTEX-ZYVF-0226-SM-5GIEG 1206.4
GTEX-13PLJ-0126-SM-5L3HU 1152.7
GTEX-145MI-0426-SM-5O99V 1086.1
GTEX-13YAN-0426-SM-5O9DR 1064.2
GTEX-XBEC-0326-SM-4AT4M 930.0
GTEX-139TU-0226-SM-5J1NM 889.9
GTEX-12ZZX-0226-SM-5DUXU 888.2
GTEX-WVJS-0226-SM-4MVOU 873.6
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 313.4
Samples: 227

Max RPKM: 1130.2
Min RPKM: 97.6
Std RPKM: 125.7
Median RPKM: 295.7
GTEX-XUZC-1126-SM-4BOPZ 1130.2
GTEX-13OVH-1126-SM-5K7YP 880.8
GTEX-YECK-1426-SM-5IFHE 762.9
GTEX-13FHO-2026-SM-5J1OA 663.9
GTEX-ZDXO-2326-SM-5LU9W 624.2
GTEX-X8HC-2326-SM-4QAS4 598.5
GTEX-1128S-0926-SM-5GZZU 579.9
GTEX-13OW7-1126-SM-5K7V6 575.7
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

505.0

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 505.0
FF:10010-101C1 65,65,76 years, mixed 505.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.