Fields »
ABOUT
HELP
BLOG
NOSIP

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:31.0TPM
GTEx:15.7RPKM
FANTOM5:25.4Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Medium
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA043464

  

Adipocytes

 Not detected  

Fibroblasts

 Medium  

Peripheral nerve

 Medium  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA043464

  

Adipocytes

 Medium  

Fibroblasts

 Medium  

Peripheral nerve

 Medium  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

31.0
N/A Female, age 80
Sample 1
TPM: 52.7
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 29.1
N/A Female, age 57
Sample 3
TPM: 29.8
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 24.1
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 19.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

15.7

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 15.8
Samples: 350

Max RPKM: 31.3
Min RPKM: 5.7
Std RPKM: 3
Median RPKM: 15.8
GTEX-Y5V6-2526-SM-5IFJV 31.3
GTEX-13G51-2626-SM-5LZYW 25.6
GTEX-ZVZP-2326-SM-59HL4 25.4
GTEX-147GR-0426-SM-5S2OL 25.0
GTEX-ZYFD-0226-SM-5NQ86 24.3
GTEX-14BMV-0226-SM-5S2N2 23.2
GTEX-X15G-2326-SM-4PQZS 22.9
GTEX-X638-0226-SM-47JZ9 22.6
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 15.6
Samples: 227

Max RPKM: 27.9
Min RPKM: 7.3
Std RPKM: 3.2
Median RPKM: 15.3
GTEX-13X6H-1726-SM-5Q5EH 27.9
GTEX-1212Z-0526-SM-5FQSQ 27.2
GTEX-13IVO-2426-SM-5K7V9 25.3
GTEX-1399S-1426-SM-5PNYQ 24.7
GTEX-YJ89-1926-SM-5IFJ6 24.0
GTEX-14A6H-1026-SM-5SIAZ 23.6
GTEX-WL46-2026-SM-3LK7U 21.9
GTEX-11WQK-1526-SM-5EGKN 21.8
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

25.4

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 25.4
FF:10010-101C1 65,65,76 years, mixed 25.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.