We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
NOSIP
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:23.6TPM
GTEx:17.2RPKM
FANTOM5:20.2Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Low
Myoepithelial cells:Not detected
 

Antibody staining

Antibody HPA043464

 

Adipocytes

Not detected  

Glandular cells

Low  

Myoepithelial cells

Not detected  
 
 
 

BREAST - HPA RNA-seq

Average TPM

23.6

overview Female, age 52
Sample 1
TPM: 30.2
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 30.7
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 23.6
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 9.9
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

17.2

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 17.2
Samples: 214

Max RPKM: 52
Min RPKM: 8.8
Std RPKM: 4.6
Median RPKM: 16.4
GTEX-14ABY-2126-SM-5QGQZ 52.0
GTEX-11TT1-2126-SM-5GU5Y 36.6
GTEX-13S86-1226-SM-5S2OA 34.7
GTEX-14AS3-1626-SM-5S2OY 32.8
GTEX-145LT-0726-SM-5S2VM 29.6
GTEX-11WQK-2426-SM-5GU5C 25.8
GTEX-13D11-1026-SM-5IJFB 25.7
GTEX-13NZB-2126-SM-5MR4Y 25.7
GTEX-Y8E4-1626-SM-5S2MW 25.0
GTEX-QEL4-2126-SM-447AE 24.8
GTEX-ZTTD-1026-SM-51MRD 24.5
GTEX-139TU-0626-SM-5KM3X 24.3
GTEX-1192X-2326-SM-5987X 24.2
GTEX-VUSG-2226-SM-4KKZO 23.8
GTEX-13NZ9-1026-SM-5MR5K 22.9
GTEX-ZVT2-1826-SM-5NQ8W 22.8
GTEX-X15G-1626-SM-3NMB3 22.7
GTEX-XQ8I-2426-SM-4WAXY 22.6
GTEX-ZYWO-2326-SM-5GZY4 22.4
GTEX-11NSD-0926-SM-5N9DR 22.2
GTEX-ZAB4-2526-SM-5HL8M 22.2
GTEX-11WQC-1726-SM-5GU4W 21.7
GTEX-ZY6K-1626-SM-5GZWV 21.4
GTEX-XQ3S-1326-SM-4BOPQ 21.2
GTEX-S32W-2026-SM-4AD6E 21.1
GTEX-13CF2-2026-SM-5K7VI 20.9
GTEX-131YS-0626-SM-5EGKL 20.8
GTEX-ZVTK-0326-SM-51MRR 20.8
GTEX-13FHO-0826-SM-5L3E8 20.7
GTEX-XMD1-0826-SM-4AT52 20.7
GTEX-U3ZN-1926-SM-4DXSG 20.6
GTEX-13W3W-1226-SM-5LU4H 20.3
GTEX-11PRG-0826-SM-5EQ6A 20.2
GTEX-133LE-1726-SM-5K7VQ 20.1
GTEX-SIU7-1626-SM-4BRUK 20.1
GTEX-YFCO-1826-SM-4W1YH 20.1
GTEX-11I78-2226-SM-5PNYA 20.0
GTEX-RUSQ-2026-SM-4GIAK 20.0
GTEX-S341-1526-SM-4AD6K 20.0
GTEX-12WSN-1326-SM-5GCNT 19.9
GTEX-1399U-1826-SM-5PNZ1 19.9
GTEX-XYKS-1326-SM-4BRUN 19.8
GTEX-Y5LM-1726-SM-4VDSX 19.8
GTEX-U8XE-0826-SM-4E3J1 19.7
GTEX-XUZC-1626-SM-4BRVP 19.7
GTEX-ZEX8-2226-SM-57WC6 19.7
GTEX-ZTX8-1226-SM-4YCE9 19.7
GTEX-Y5V6-2126-SM-4WWFX 19.6
GTEX-11ZUS-0826-SM-5FQUY 19.4
GTEX-13FTY-2226-SM-5J1ND 19.4
GTEX-11DZ1-0326-SM-5N9BN 19.3
GTEX-145MN-1926-SM-5SIAI 19.1
GTEX-XUW1-2326-SM-4BOO5 19.0
GTEX-11EQ9-1826-SM-5Q5AJ 18.9
GTEX-YFC4-1426-SM-5IFJG 18.8
GTEX-11LCK-2426-SM-5HL5F 18.7
GTEX-QVJO-1826-SM-447C9 18.7
GTEX-QEG5-0726-SM-4R1JQ 18.6
GTEX-ZYT6-0126-SM-5E45J 18.6
GTEX-ZUA1-1526-SM-59HLS 18.5
GTEX-139T8-0826-SM-5L3DE 18.4
GTEX-U3ZH-1426-SM-4DXSR 18.4
GTEX-S33H-0326-SM-4AD6N 18.3
GTEX-11DXW-0626-SM-5N9ER 18.2
GTEX-132AR-0826-SM-5EGK6 18.2
GTEX-XMD2-0926-SM-4WWEF 18.2
GTEX-XV7Q-2326-SM-4BRVZ 18.2
GTEX-ZV6S-1826-SM-5NQ8D 18.2
GTEX-UPK5-2326-SM-3P5Z8 18.1
GTEX-XMK1-1126-SM-4IHJ8 18.1
GTEX-11EMC-2026-SM-5A5JV 18.0
GTEX-T2YK-2226-SM-32QPT 18.0
GTEX-ZVZQ-0826-SM-51MRF 17.9
GTEX-111YS-1926-SM-5GICC 17.8
GTEX-12WSB-0626-SM-59HJO 17.8
GTEX-144GL-2026-SM-5LU3O 17.8
GTEX-145MO-0826-SM-5NQBL 17.8
GTEX-ZYFC-0826-SM-5E44K 17.8
GTEX-S7SE-0826-SM-4AT4D 17.7
GTEX-ZLFU-2126-SM-4WWEV 17.7
GTEX-ZWKS-2826-SM-5NQ74 17.7
GTEX-ZLV1-1426-SM-4WWES 17.6
GTEX-11GS4-2126-SM-5A5KR 17.5
GTEX-13PL6-2926-SM-5L3I2 17.5
GTEX-Y111-2026-SM-4SOJA 17.5
GTEX-ZU9S-1926-SM-5NQBP 17.5
GTEX-11OF3-1926-SM-59889 17.4
GTEX-12ZZX-1126-SM-5EGKB 17.4
GTEX-1122O-1226-SM-5H113 17.1
GTEX-Q2AG-0326-SM-48U1O 17.1
GTEX-SE5C-2126-SM-4BRUJ 17.1
GTEX-T5JC-2126-SM-32PMO 17.1
GTEX-ZZ64-1226-SM-5E43R 17.1
GTEX-XBED-1626-SM-47JYN 17.0
GTEX-ZVE2-1226-SM-5NQ8R 16.9
GTEX-11NV4-2026-SM-5N9DG 16.8
GTEX-S4Q7-1126-SM-4AD6R 16.8
GTEX-WY7C-2726-SM-3NB3P 16.8
GTEX-ZC5H-2626-SM-5J2MG 16.8
GTEX-11P7K-0726-SM-5EGKX 16.6
GTEX-13N11-1726-SM-5J1OJ 16.6
GTEX-13O61-1826-SM-5KM4I 16.6
GTEX-ZDTT-2126-SM-5S2OJ 16.6
GTEX-ZZPU-0626-SM-5E43T 16.6
GTEX-11EI6-0626-SM-5985T 16.5
GTEX-T2IS-1526-SM-32QPR 16.5
GTEX-132NY-0826-SM-5K7Y7 16.4
GTEX-13OW5-2226-SM-5L3HC 16.4
GTEX-T6MN-0726-SM-32PML 16.4
GTEX-XGQ4-0926-SM-4AT4U 16.4
GTEX-ZAJG-0626-SM-5HL8X 16.3
GTEX-11GSO-1926-SM-5A5K3 16.2
GTEX-T5JW-2026-SM-4DM63 16.2
GTEX-WYJK-1326-SM-3NB2T 16.2
GTEX-1117F-2826-SM-5GZXL 16.1
GTEX-13CF3-2126-SM-5IFJP 16.1
GTEX-QDT8-0626-SM-48TYW 16.1
GTEX-XUJ4-1926-SM-4BOOV 16.1
GTEX-Y8LW-1626-SM-5IFHX 16.1
GTEX-ZF2S-2026-SM-5E461 16.1
GTEX-ZT9W-2026-SM-51MRA 16.1
GTEX-ZXES-0826-SM-5E43C 16.1
GTEX-UJHI-1426-SM-3DB9C 16.0
GTEX-12WSK-2226-SM-5GCO5 15.9
GTEX-146FH-0826-SM-5SI8T 15.9
GTEX-RU72-0626-SM-46MUI 15.9
GTEX-R53T-1526-SM-48FEK 15.8
GTEX-1313W-0826-SM-5EQ4T 15.7
GTEX-131XW-0726-SM-5EGK3 15.7
GTEX-PSDG-1626-SM-48TCQ 15.7
GTEX-S4P3-1326-SM-4AD6V 15.7
GTEX-Y5V5-2126-SM-4WWFO 15.7
GTEX-11O72-2126-SM-5N9FO 15.6
GTEX-13FTW-1426-SM-5LZWZ 15.6
GTEX-13O3O-0826-SM-5K7WE 15.6
GTEX-14E6E-1326-SM-5S2NR 15.6
GTEX-X261-0626-SM-3NMD9 15.6
GTEX-11DXY-2326-SM-5GICW 15.5
GTEX-1211K-1926-SM-5EQLB 15.5
GTEX-13FTX-1126-SM-5N9EN 15.5
GTEX-11P81-1926-SM-5BC53 15.3
GTEX-1269C-2426-SM-5FQSN 15.3
GTEX-YEC3-1026-SM-5IFI5 15.3
GTEX-132Q8-1426-SM-5EGK7 15.2
GTEX-XOT4-0726-SM-4GIAW 15.2
GTEX-1314G-1226-SM-5BC6D 15.1
GTEX-139T6-1626-SM-5PNYZ 15.1
GTEX-13QIC-2326-SM-5LU5N 15.1
GTEX-WXYG-2226-SM-4E3IM 15.1
GTEX-WYVS-1726-SM-3NMAY 15.1
GTEX-11ONC-2126-SM-5HL6E 15.0
GTEX-12BJ1-1826-SM-5HL9N 15.0
GTEX-R3RS-0626-SM-48FE1 15.0
GTEX-ZDYS-1126-SM-5K7UB 15.0
GTEX-ZVT4-1026-SM-57WC4 15.0
GTEX-Y9LG-1426-SM-5IFJZ 14.9
GTEX-ZQUD-1926-SM-51MSA 14.9
GTEX-13O3P-0826-SM-5L3DH 14.8
GTEX-R55D-0826-SM-48FEA 14.8
GTEX-Y3I4-1526-SM-4TT7K 14.8
GTEX-11ZTT-2326-SM-5EQLG 14.7
GTEX-WRHU-0326-SM-3MJFY 14.7
GTEX-ZV7C-1826-SM-5NQ83 14.7
GTEX-13OW8-0226-SM-5K7UP 14.6
GTEX-12WSM-1726-SM-5BC6J 14.5
GTEX-QMRM-1626-SM-4R1KV 14.5
GTEX-S4UY-0726-SM-4AD6X 14.5
GTEX-Y114-2026-SM-4TT7L 14.5
GTEX-YJ8O-2226-SM-5IFHW 14.5
GTEX-11DXZ-1926-SM-5GZZL 14.4
GTEX-12KS4-0126-SM-5Q5A5 14.3
GTEX-117YX-1426-SM-5H12H 14.2
GTEX-13O3Q-2226-SM-5KM4O 14.1
GTEX-WOFL-0826-SM-3MJG1 14.0
GTEX-Y3IK-2326-SM-4WWDT 14.0
GTEX-YB5E-1726-SM-5IFJ3 13.9
GTEX-YB5K-1626-SM-5IFIN 13.9
GTEX-13113-1726-SM-5GCOO 13.8
GTEX-RWS6-1926-SM-47JXY 13.8
GTEX-147F4-2826-SM-5NQBN 13.7
GTEX-117XS-1926-SM-5GICO 13.6
GTEX-145ME-1526-SM-5Q5F2 13.4
GTEX-REY6-2426-SM-48FF5 13.4
GTEX-ZYW4-0826-SM-5GIDG 13.4
GTEX-TML8-1226-SM-32QON 13.3
GTEX-ZDXO-0126-SM-5S2ND 13.3
GTEX-ZF29-1926-SM-5S2P1 13.3
GTEX-ZA64-1526-SM-5CVMD 13.2
GTEX-13W46-0826-SM-5LU3H 13.1
GTEX-T6MO-0326-SM-32QOK 13.1
GTEX-X4XY-0926-SM-4E3JD 13.0
GTEX-ZPIC-1126-SM-5BC7F 13.0
GTEX-11EM3-1326-SM-5N9C6 12.9
GTEX-R55F-1726-SM-2TF4R 12.8
GTEX-WYBS-0926-SM-3NM94 12.8
GTEX-11P82-1326-SM-5HL62 12.6
GTEX-11TUW-1826-SM-5BC5D 12.5
GTEX-13NZ8-0126-SM-5IJCT 12.3
GTEX-WI4N-1426-SM-3LK7H 12.3
GTEX-TMMY-0726-SM-33HBE 12.2
GTEX-144GM-0926-SM-5O994 12.1
GTEX-TKQ1-0226-SM-33HB5 12.1
GTEX-X4EP-2926-SM-3P5YQ 12.0
GTEX-ZQG8-0726-SM-5P9H9 12.0
GTEX-14753-2426-SM-5LU8U 11.7
GTEX-TKQ2-1826-SM-33HB2 11.7
GTEX-ZF3C-2326-SM-5S2MZ 11.5
GTEX-13PVQ-1026-SM-5KM3M 11.1
GTEX-13N1W-0626-SM-5MR4U 10.8
GTEX-UTHO-1026-SM-3GAF7 10.4
GTEX-WFON-1826-SM-3GILG 10.1
GTEX-U412-1826-SM-4DXTJ 9.6
GTEX-VJWN-0726-SM-3GIJ8 8.8
GTEX-W5X1-2326-SM-3GIL6 8.8
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

20.2

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 20.2
FF:10080-102A8 77 years, female 20.2

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.