We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
NOSIP
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:10.9TPM
GTEx:10.2RPKM
FANTOM5:26.5Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Low
Hepatocytes:Medium
 

Antibody staining

Antibody HPA043464

 

Bile duct cells

Low  

Hepatocytes

Medium  
 
 
 

LIVER - HPA RNA-seq

Average TPM

10.9

N/A Female, age 60
Sample 1
TPM: 18.2
overview Male, age 54
Sample 2
TPM: 17.5
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 17.7
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 2.9
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 4.6
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 6.7
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 5.5
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 13.3
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 9.7
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 12.9
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

10.2

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 10.2
Samples: 119

Max RPKM: 17.7
Min RPKM: 4.9
Std RPKM: 2.2
Median RPKM: 10
GTEX-UTHO-2426-SM-4JBHD 17.7
GTEX-13SLX-1226-SM-5S2Q6 16.5
GTEX-13NZ9-1326-SM-5MR3V 16.2
GTEX-ZTPG-1426-SM-51MT3 15.9
GTEX-1497J-0726-SM-5Q5D1 14.6
GTEX-REY6-1226-SM-48FDR 14.4
GTEX-13QJC-0726-SM-5RQJK 14.0
GTEX-13N11-0926-SM-5IJG2 13.7
GTEX-S32W-1926-SM-4AD63 13.6
GTEX-QEL4-1226-SM-447A4 13.4
GTEX-RU72-1426-SM-46MUF 13.4
GTEX-14C38-1526-SM-5RQJ7 13.3
GTEX-ZYY3-0626-SM-5NQ6W 13.2
GTEX-T6MN-1226-SM-3NMA5 13.1
GTEX-12WSG-0626-SM-5FQTQ 12.9
GTEX-139TS-1426-SM-5IFJD 12.4
GTEX-XOTO-0826-SM-4B65O 12.4
GTEX-YFC4-1526-SM-5IFJS 12.4
GTEX-UPIC-0926-SM-4IHLV 12.2
GTEX-147F4-1426-SM-5LUA8 12.1
GTEX-12696-0826-SM-5EGGE 12.0
GTEX-12KS4-1326-SM-5LUB3 12.0
GTEX-SJXC-1226-SM-4DM78 12.0
GTEX-131YS-1626-SM-5HL6C 11.9
GTEX-139YR-0226-SM-5IFEM 11.9
GTEX-146FH-1526-SM-5NQBU 11.9
GTEX-P78B-1326-SM-3P611 11.9
GTEX-YB5E-0326-SM-5IFHU 11.8
GTEX-ZAB4-0826-SM-5LU9D 11.8
GTEX-ZVT4-0626-SM-5E45T 11.8
GTEX-X261-1726-SM-4PQYT 11.5
GTEX-13FLV-0326-SM-5N9DJ 11.4
GTEX-RNOR-1426-SM-48FDJ 11.4
GTEX-X4XY-1626-SM-46MVN 11.3
GTEX-XBEC-1526-SM-4AT68 11.3
GTEX-13NYB-1026-SM-5IFH3 11.2
GTEX-YECK-1926-SM-4W21H 11.2
GTEX-147JS-1126-SM-5RQIW 11.1
GTEX-RN64-1826-SM-48FDV 11.1
GTEX-S33H-1626-SM-4AD68 11.1
GTEX-11GSP-0626-SM-5986T 11.0
GTEX-WQUQ-1926-SM-4OOSA 10.9
GTEX-145LU-1326-SM-5LU9N 10.8
GTEX-RTLS-1326-SM-46MUN 10.8
GTEX-Y5LM-0426-SM-4VBRO 10.8
GTEX-12WSD-1426-SM-5GCN9 10.7
GTEX-RWSA-1426-SM-47JXA 10.4
GTEX-11NUK-1226-SM-5P9GM 10.3
GTEX-1212Z-0226-SM-59HLF 10.3
GTEX-PX3G-0826-SM-48TZS 10.3
GTEX-Q734-0326-SM-48U15 10.3
GTEX-WYVS-1926-SM-4PQZ2 10.3
GTEX-X4EP-1026-SM-4QAS5 10.3
GTEX-ZYT6-0626-SM-5E45V 10.2
GTEX-12WSM-0726-SM-5GCOW 10.1
GTEX-139TU-0826-SM-5IJFG 10.1
GTEX-13OW6-2626-SM-5IFF2 10.1
GTEX-145MF-0826-SM-5QGQA 10.1
GTEX-ZVT3-1626-SM-5GU66 10.1
GTEX-132NY-0926-SM-5P9G3 10.0
GTEX-11NV4-1326-SM-5HL6V 9.9
GTEX-13VXU-0926-SM-5IFFH 9.9
GTEX-14AS3-0126-SM-5Q5F4 9.9
GTEX-14DAQ-1726-SM-5S2R2 9.9
GTEX-Q2AG-1126-SM-48U1P 9.9
GTEX-1269C-0626-SM-5FQSS 9.8
GTEX-12WSI-0226-SM-5GCNA 9.8
GTEX-WZTO-0626-SM-4PQYY 9.8
GTEX-11DXY-0526-SM-5EGGQ 9.7
GTEX-1399T-0826-SM-5IFES 9.7
GTEX-13NZB-0626-SM-5IFH6 9.7
GTEX-QESD-2026-SM-447BI 9.7
GTEX-131XE-0326-SM-5LZVO 9.6
GTEX-13FTW-1126-SM-5J2NV 9.6
GTEX-13112-1426-SM-5EGH8 9.5
GTEX-13113-1326-SM-5GCOI 9.4
GTEX-QEG4-1826-SM-4R1JN 9.4
GTEX-12WSL-0226-SM-5CVMJ 9.3
GTEX-11WQC-0726-SM-5EQMR 9.2
GTEX-13O3O-1826-SM-5IFGW 9.2
GTEX-X4EO-1126-SM-4QARQ 9.2
GTEX-13N2G-0926-SM-5IFGJ 9.1
GTEX-145MO-2326-SM-5NQ9K 9.1
GTEX-S4Z8-0526-SM-4AD4T 9.0
GTEX-QDVN-0826-SM-48TZ2 8.9
GTEX-11ZUS-2526-SM-59872 8.8
GTEX-131XH-0626-SM-5LZWH 8.7
GTEX-X3Y1-2726-SM-4PQZH 8.7
GTEX-WFON-1726-SM-4LVMQ 8.6
GTEX-UPK5-1426-SM-4JBHH 8.5
GTEX-ZAB5-0426-SM-5CVMI 8.5
GTEX-11DXZ-0126-SM-5EGGY 8.4
GTEX-14A5I-1726-SM-5QGQ5 8.3
GTEX-VUSG-0126-SM-4KL1X 8.3
GTEX-R53T-0326-SM-48FEC 8.2
GTEX-11EQ9-0526-SM-5A5JZ 8.1
GTEX-ZVP2-0626-SM-51MSO 8.1
GTEX-13FTZ-0726-SM-5IFFY 8.0
GTEX-YEC4-0826-SM-5P9FV 8.0
GTEX-ZF2S-3026-SM-4WWCH 8.0
GTEX-1399R-1226-SM-5P9GF 7.9
GTEX-Y5V5-0926-SM-4VBPZ 7.9
GTEX-ZF29-2026-SM-4WWB7 7.8
GTEX-13PVR-0126-SM-5S2PY 7.7
GTEX-OOBJ-0826-SM-3NB2K 7.7
GTEX-11ZTS-1426-SM-5EQMM 7.6
GTEX-11OF3-0726-SM-5BC4Z 7.5
GTEX-11ZVC-0726-SM-5FQT9 7.5
GTEX-TKQ2-1726-SM-4DXUP 7.4
GTEX-RM2N-1926-SM-48FCU 7.3
GTEX-144GM-1326-SM-5LU5E 7.2
GTEX-14E1K-0326-SM-5S2PE 7.2
GTEX-QV44-0326-SM-4R1KD 7.2
GTEX-14753-1626-SM-5NQ9L 7.1
GTEX-Z9EW-0426-SM-5CVM9 6.7
GTEX-ZZPU-0426-SM-5GZYH 6.6
GTEX-ZPU1-0826-SM-57WG2 6.4
GTEX-12ZZZ-1326-SM-59HKW 5.5
GTEX-U3ZN-0226-SM-3DB8D 4.9
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

26.5

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 26.5
FF:10018-101C9 64,69,70 years, mixed 26.5

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.