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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:68.5TPM
GTEx:22.7RPKM
FANTOM5:52.9Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Not detected
 

Antibody staining

Antibody HPA003996

 

Glandular cells

Not detected  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

68.5

overview Male, age 65
Sample 1
TPM: 60.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 65.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 74.9
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 74.0

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

22.7

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 22.7
Samples: 88

Max RPKM: 58.3
Min RPKM: 11.5
Std RPKM: 9.5
Median RPKM: 20.1
GTEX-WFG8-1626-SM-4LVMB 58.3
GTEX-1192X-2526-SM-59868 53.7
GTEX-UPK5-2026-SM-4JBIM 50.7
GTEX-Y5LM-1626-SM-4VDTB 45.2
GTEX-XMK1-1826-SM-4B66F 43.2
GTEX-111CU-1326-SM-5NQ8L 42.5
GTEX-131XG-1726-SM-5LZUR 40.8
GTEX-13OVI-1926-SM-5IJCG 39.2
GTEX-117YX-0326-SM-5GICL 35.0
GTEX-ZTPG-2626-SM-57WFX 34.7
GTEX-13111-1426-SM-5DUW3 34.7
GTEX-148VJ-2226-SM-5NQ9M 34.2
GTEX-13QBU-1926-SM-5IJEW 34.1
GTEX-ZP4G-1626-SM-57WGD 29.4
GTEX-ZQG8-2526-SM-57WEQ 29.1
GTEX-ZC5H-2326-SM-4WAYT 29.1
GTEX-133LE-1426-SM-5IFH1 28.4
GTEX-WFG7-1726-SM-4LVME 27.5
GTEX-ZPIC-2326-SM-57WDW 27.1
GTEX-ZA64-1226-SM-5HL7B 26.9
GTEX-13O21-1026-SM-5IJDU 26.8
GTEX-ZVT2-2126-SM-5NQ93 26.8
GTEX-12WSK-1526-SM-5CVNO 26.0
GTEX-XAJ8-0526-SM-47JYK 25.6
GTEX-ZF2S-1726-SM-57WFT 25.3
GTEX-Y3IK-1726-SM-4YCCR 24.9
GTEX-Z9EW-0926-SM-5CVMM 24.5
GTEX-WRHK-1026-SM-4MVOD 23.8
GTEX-145ME-0926-SM-5O9AR 23.6
GTEX-139YR-2226-SM-5IFFW 23.4
GTEX-13RTK-0826-SM-5Q5C6 23.2
GTEX-ZQUD-0926-SM-57WE3 22.9
GTEX-XXEK-1026-SM-4BRUW 22.8
GTEX-XGQ4-1326-SM-4GIDU 22.1
GTEX-ZYWO-1526-SM-5SIAL 21.9
GTEX-1399R-2026-SM-5K7WN 21.0
GTEX-139T6-1026-SM-5IJGC 21.0
GTEX-ZYFG-2026-SM-5E43Y 21.0
GTEX-ZXES-1526-SM-5NQ95 21.0
GTEX-145LT-1026-SM-5LU9O 20.6
GTEX-13113-1226-SM-5EGHT 20.6
GTEX-VUSG-1726-SM-4KKZL 20.6
GTEX-13PL7-2626-SM-5IFH4 20.5
GTEX-13CF3-1226-SM-5LZXN 20.3
GTEX-XBED-1426-SM-4AT4G 19.9
GTEX-X15G-1426-SM-4PQZK 19.3
GTEX-ZLV1-1126-SM-4WWBW 19.0
GTEX-WQUQ-2426-SM-4MVNW 18.8
GTEX-ZEX8-1826-SM-57WBH 18.3
GTEX-WEY5-1526-SM-4LMJF 18.1
GTEX-12BJ1-1926-SM-5HL9Z 17.9
GTEX-X5EB-1626-SM-4E3IV 17.9
GTEX-13FTW-2026-SM-5IJE2 17.9
GTEX-VJYA-0926-SM-4KL1N 17.8
GTEX-Y114-1426-SM-4TT6W 17.8
GTEX-ZZ64-0526-SM-5GZXM 17.5
GTEX-11P7K-1626-SM-5GU63 17.3
GTEX-XUZC-1426-SM-4BRV3 17.1
GTEX-YB5E-1526-SM-5IFIE 17.0
GTEX-ZTX8-0526-SM-59HLD 17.0
GTEX-11DXZ-1326-SM-5H11X 16.7
GTEX-1399U-2126-SM-5IFEZ 16.7
GTEX-11NSD-1726-SM-5N9C3 16.4
GTEX-11EQ9-1326-SM-5985X 16.3
GTEX-131XF-1326-SM-5GCMQ 16.3
GTEX-14E6E-1626-SM-5RQI7 16.2
GTEX-13O61-1326-SM-5KM31 16.1
GTEX-11XUK-1426-SM-5EQMG 15.9
GTEX-ZVZP-1826-SM-5GZXB 15.9
GTEX-YEC4-1726-SM-4W21E 15.9
GTEX-11P82-0826-SM-5P9GU 15.8
GTEX-WH7G-1626-SM-4LVMY 15.6
GTEX-11I78-1126-SM-5A5K5 15.5
GTEX-11DXX-1626-SM-5H11H 15.4
GTEX-14DAR-1426-SM-5RQIR 15.2
GTEX-YF7O-1826-SM-5IFIU 15.1
GTEX-ZLFU-1526-SM-4WWBT 14.9
GTEX-13FH7-1226-SM-5IJFK 14.6
GTEX-Y9LG-1626-SM-5IFHM 14.5
GTEX-ZVP2-1726-SM-5GU5P 14.0
GTEX-13D11-0726-SM-5LZZB 13.9
GTEX-1399S-2026-SM-5KM4B 13.8
GTEX-ZTSS-0926-SM-59865 13.7
GTEX-WFJO-0926-SM-4LVM2 13.2
GTEX-1122O-1326-SM-5H11F 12.9
GTEX-ZPCL-1726-SM-57WEO 12.7
GTEX-111YS-1426-SM-5GID8 12.6
GTEX-11VI4-1626-SM-5EQKO 11.5
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

52.9

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 52.9
FF:10024-101D6 15,40,85 years, mixed 52.9

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