We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
RAB13
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:83.4TPM
GTEx:31.9RPKM
FANTOM5:64.0Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Not detected
Cells in white pulp:Not detected
 

Antibody staining

Antibody HPA003996

 

Cells in red pulp

Not detected  

Cells in white pulp

Not detected  
 
 
 

SPLEEN - HPA RNA-seq

Average TPM

83.4

overview Female, age 60
Sample 1
TPM: 88.4
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 72.6
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 68.0
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 94.2
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 93.9
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

31.9

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 31.9
Samples: 104

Max RPKM: 56.6
Min RPKM: 15.3
Std RPKM: 8.6
Median RPKM: 30.6
GTEX-131XG-0426-SM-5IFGD 56.6
GTEX-ZYWO-0226-SM-5GZX3 55.7
GTEX-YB5E-0426-SM-5IFHR 53.6
GTEX-XPVG-0626-SM-4B65B 52.0
GTEX-12WSG-0926-SM-5EGIH 51.3
GTEX-12WSJ-0526-SM-5GCOZ 48.3
GTEX-RUSQ-0126-SM-47JWV 48.0
GTEX-XV7Q-0126-SM-4BRVK 46.6
GTEX-X585-1826-SM-4QAS3 45.6
GTEX-PLZ6-0126-SM-48TC6 44.3
GTEX-QMRM-0226-SM-4R1K7 43.9
GTEX-132QS-0226-SM-5IFFZ 43.1
GTEX-ZDTT-1026-SM-5KM19 42.6
GTEX-U4B1-0526-SM-4DXTK 42.0
GTEX-ZYFG-0726-SM-5GIDX 41.2
GTEX-QDVN-0526-SM-48TZ4 40.6
GTEX-Q734-0226-SM-48U1A 39.9
GTEX-145MN-0126-SM-5RQHY 38.9
GTEX-12BJ1-0726-SM-5EGGF 38.2
GTEX-S4Z8-0226-SM-4AD5K 37.4
GTEX-144GN-2126-SM-5O99D 37.3
GTEX-ZVZP-0726-SM-59HKA 37.1
GTEX-O5YT-0926-SM-48TDG 37.0
GTEX-ZPU1-1026-SM-4YCEQ 36.1
GTEX-ZZPU-0126-SM-5E446 36.0
GTEX-T5JW-0126-SM-4DM6K 35.7
GTEX-13X6H-0726-SM-5Q5BX 35.6
GTEX-YB5K-1926-SM-4VDT4 35.6
GTEX-WHWD-0126-SM-4OORS 35.4
GTEX-OIZH-0926-SM-48TBR 35.2
GTEX-13CF3-0226-SM-5J1NW 34.7
GTEX-12WSN-0126-SM-5DUX5 34.6
GTEX-XXEK-0126-SM-4BRVU 34.6
GTEX-146FQ-0626-SM-5LU9U 34.5
GTEX-S3XE-0626-SM-4AD6B 34.3
GTEX-13FH7-1326-SM-5IFG8 34.0
GTEX-ZLWG-0426-SM-4WWFA 34.0
GTEX-UJHI-0126-SM-4IHLP 33.9
GTEX-14DAR-0326-SM-5S2PS 33.8
GTEX-1211K-0426-SM-5FQTP 33.7
GTEX-14E6E-1226-SM-5S2R5 33.4
GTEX-W5WG-0626-SM-4SOID 33.4
GTEX-XUJ4-0226-SM-4BOP8 33.3
GTEX-139T6-0226-SM-5IFGZ 33.2
GTEX-1399S-0226-SM-5IFFG 33.0
GTEX-13PVR-0326-SM-5RQJY 32.9
GTEX-P4QS-0926-SM-48TBS 32.9
GTEX-YFCO-0926-SM-5LUA5 32.4
GTEX-Q2AH-0226-SM-48U1I 32.1
GTEX-11XUK-0426-SM-5EQML 31.5
GTEX-11P81-1326-SM-5GU5S 31.3
GTEX-U3ZN-0126-SM-4DXUM 30.6
GTEX-13S86-0126-SM-5S2PI 30.5
GTEX-POMQ-0126-SM-48TD6 30.5
GTEX-ZV6S-0826-SM-5NQ6Z 30.2
GTEX-11EQ9-0426-SM-5A5JY 30.0
GTEX-P4PP-0926-SM-48TBZ 29.5
GTEX-11NSD-0426-SM-5N9CR 29.3
GTEX-WFON-0126-SM-4LVM9 29.1
GTEX-QCQG-0226-SM-48U28 29.0
GTEX-U3ZH-0126-SM-4DXUK 29.0
GTEX-QLQW-0126-SM-447BK 28.7
GTEX-UPK5-1626-SM-4JBHI 28.7
GTEX-1122O-0526-SM-5N9DM 28.6
GTEX-ZAB5-0526-SM-5CVMU 28.3
GTEX-Z9EW-0726-SM-5HL9H 28.1
GTEX-13111-0126-SM-5EGHO 28.0
GTEX-R55G-0226-SM-48FEI 28.0
GTEX-X4LF-0226-SM-4QAS8 27.9
GTEX-131XE-1126-SM-5EGHW 27.6
GTEX-Y5LM-0326-SM-4VBRN 27.6
GTEX-QV31-0126-SM-447BP 27.4
GTEX-11LCK-0126-SM-5A5M5 27.3
GTEX-X3Y1-0126-SM-4PQZA 27.3
GTEX-13N11-0126-SM-5KM2Z 26.8
GTEX-147F3-0126-SM-5NQBJ 26.7
GTEX-XQ8I-1726-SM-4BOQB 26.7
GTEX-XGQ4-0126-SM-4AT4H 26.6
GTEX-ZVP2-0526-SM-51MSC 26.3
GTEX-Y3I4-0126-SM-4TT26 26.0
GTEX-117YX-2126-SM-5GIEL 25.9
GTEX-13PL7-1126-SM-5MR5O 25.8
GTEX-139YR-0426-SM-5IFFV 25.5
GTEX-XMK1-0126-SM-4B65F 25.4
GTEX-1399R-0226-SM-5IJGG 25.2
GTEX-11DXX-0726-SM-5H12X 24.3
GTEX-Y114-0726-SM-4TT6U 24.3
GTEX-PW2O-0126-SM-48TC8 24.1
GTEX-11VI4-0126-SM-5GU6Z 23.7
GTEX-VJYA-0126-SM-4KL1P 22.8
GTEX-QV44-0126-SM-4R1KH 22.5
GTEX-YEC4-0126-SM-4W21T 22.3
GTEX-ZP4G-0326-SM-4YCEF 21.4
GTEX-XAJ8-0126-SM-47JYG 21.2
GTEX-PX3G-0926-SM-48U12 20.9
GTEX-11P7K-0426-SM-5BC5H 20.6
GTEX-ZLFU-0526-SM-4WWBN 20.5
GTEX-13VXT-1326-SM-5LU3Y 19.2
GTEX-12WSK-0126-SM-5GCO7 18.7
GTEX-146FR-1926-SM-5NQA6 18.7
GTEX-Y8LW-0126-SM-4VBS1 18.7
GTEX-OOBJ-0926-SM-48TDO 18.3
GTEX-13U4I-1626-SM-5IFFR 15.3
GTEX-Y3IK-0126-SM-4WWE9 15.3
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

64.0

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 64.0
FF:10025-101D7 39,50,70 years, male 64.0

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.