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TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:16.3RPKM
FANTOM5:87.7Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:High
 

Antibody staining

Antibody HPA045168

 

Antibody CAB000147

 

Antibody CAB003839

 

Antibody CAB003840

 

Antibody CAB075726

 

Antibody CAB075727

 

Glial cells

High   Not detected   Not detected   Not detected   High   High  

Neuronal cells

Medium   Not detected   Not detected   High   High   High  
           
           
           

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

16.3

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 16.3
Samples: 94

Max RPKM: 27.2
Min RPKM: 5
Std RPKM: 5.2
Median RPKM: 16.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 27.2
GTEX-13OVJ-0011-R1b-SM-5L3I6 26.1
GTEX-WZTO-0011-R1B-SM-3NMAR 25.7
GTEX-QVUS-0011-R1A-SM-3GAD2 25.4
GTEX-QVJO-0011-R1A-SM-2S1QI 24.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 24.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 24.0
GTEX-QMR6-0011-R1A-SM-32PKW 23.6
GTEX-UTHO-0011-R1A-SM-3GIJO 23.5
GTEX-X4XX-0011-R1B-SM-3P622 23.5
GTEX-13JUV-0011-R1a-SM-5LZY4 23.2
GTEX-ZAB4-0011-R1a-SM-4RGNO 22.9
GTEX-11GSO-0011-R1b-SM-57WD3 22.3
GTEX-13OW5-0011-R1b-SM-5L3GE 22.2
GTEX-13G51-0011-R1a-SM-5LZYR 21.9
GTEX-T6MN-0011-R1A-SM-32QOY 21.6
GTEX-13N2G-0011-R1b-SM-5MR3G 21.1
GTEX-P44H-0011-R1A-SM-3NM8J 21.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 21.0
GTEX-13N1W-0011-R1b-SM-5MR4T 20.4
GTEX-145LS-0011-R1b-SM-5PNUP 20.4
GTEX-PWO3-0011-R1A-SM-2I5EW 20.4
GTEX-PVOW-0011-R1A-SM-32PL6 20.1
GTEX-13OVL-0011-R1a-SM-5L3H5 20.0
GTEX-13NYS-0011-R1b-SM-5MR55 19.6
GTEX-13JVG-0011-R1a-SM-5KM32 19.5
GTEX-13S7M-0011-R1b-SM-5PNZE 19.4
GTEX-ZUA1-0011-R1a-SM-4YCE2 19.4
GTEX-QDT8-0011-R1A-SM-32PKS 19.4
GTEX-R55E-0011-R1A-SM-2TC6N 19.3
GTEX-XMD1-0011-R1A-SM-4AT4C 19.0
GTEX-WL46-0011-R1A-SM-3LK6M 18.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 18.5
GTEX-N7MT-0011-R1a-SM-5SI7S 18.5
GTEX-13OW6-0011-R1a-SM-5L3HQ 18.4
GTEX-1313W-0011-R1b-SM-5EQ4A 18.3
GTEX-WWYW-0011-R1A-SM-3TW8G 18.1
GTEX-13FHO-0011-R1b-SM-5KLZG 18.1
GTEX-131XH-0011-R1a-SM-5DUWA 18.0
GTEX-12WSH-0011-R1a-SM-5GU5V 17.3
GTEX-XOTO-0011-R1B-SM-4B65C 17.3
GTEX-11UD1-0011-R1b-SM-5BC7D 17.2
GTEX-N7MS-0011-R1a-SM-2HMJG 17.2
GTEX-13FXS-0011-R1a-SM-5K7U6 17.1
GTEX-13OW8-0011-R1a-SM-5L3HI 17.0
GTEX-145MH-0011-R1b-SM-5PNWY 16.8
GTEX-RNOR-0011-R1A-SM-5SI8F 16.7
GTEX-X585-0011-R1B-SM-46MVE 16.6
GTEX-14ASI-0011-R1b-SM-5S2TY 16.2
GTEX-11ZTS-0011-R1a-SM-5BC71 16.1
GTEX-1212Z-0011-R1b-SM-5BC72 16.0
GTEX-YFC4-0011-R1a-SM-4V6EH 16.0
GTEX-12WSF-0011-R1a-SM-5DUVI 15.9
GTEX-13X6I-0011-R1b-SM-5PNZC 15.5
GTEX-13QJC-0011-R1b-SM-5S2UU 15.3
GTEX-144GL-0011-R1a-SM-5PNZ5 15.2
GTEX-131YS-0011-R1a-SM-5DUXC 15.2
GTEX-139TT-0011-R1a-SM-5LZVD 15.0
GTEX-13O3O-0011-R1b-SM-5KM2K 15.0
GTEX-T5JC-0011-R1A-SM-32PM6 14.9
GTEX-11ZVC-0011-R1b-SM-5BC6M 14.1
GTEX-TSE9-0011-R1A-SM-3DB7E 13.9
GTEX-NPJ8-0011-R1a-SM-33HCB 13.8
GTEX-13FLW-0011-R1b-SM-5LZX2 13.7
GTEX-12WSB-0011-R1b-SM-5P9EY 13.6
GTEX-12WSD-0011-R1b-SM-5LZVY 13.3
GTEX-13NZA-0011-R1b-SM-5LUAF 13.2
GTEX-13NYB-0011-R1b-SM-5KM4F 13.1
GTEX-S7SE-0011-R1A-SM-2XCDE 13.1
GTEX-13RTL-0011-R1a-SM-5PNZ8 13.0
GTEX-NPJ7-0011-R1a-SM-3GACT 12.9
GTEX-13SLW-0011-R1a-SM-5S2W7 12.9
GTEX-12WSE-0011-R1b-SM-5GU4V 12.6
GTEX-13OW7-0011-R1b-SM-5L3HF 12.5
GTEX-1399T-0011-R1b-SM-5DUWN 12.5
GTEX-12WSM-0011-R1a-SM-5LZW6 12.4
GTEX-132Q8-0011-R1a-SM-5EGLK 11.9
GTEX-13112-0011-R1b-SM-5HL7K 11.9
GTEX-WVLH-0011-R1A-SM-4MVOK 11.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 11.7
GTEX-11ONC-0011-R1a-SM-57WD4 11.1
GTEX-145LU-0011-R1a-SM-5Q5CE 11.1
GTEX-13PDP-0011-R1a-SM-5PNX5 8.6
GTEX-ZVZQ-0011-R1a-SM-57WBU 8.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 8.1
GTEX-13FHP-0011-R1b-SM-5K7XL 7.6
GTEX-YJ89-0011-R1a-SM-4RGLS 7.5
GTEX-NL3H-0011-R1a-SM-48TDJ 7.3
GTEX-144GO-0011-R1a-SM-5PNWO 7.0
GTEX-13CF2-0011-R1a-SM-5LZY1 6.9
GTEX-ZF28-0011-R1a-SM-4WWD1 6.4
GTEX-13FTY-0011-R1a-SM-5LZXE 6.1
GTEX-139T8-0011-R1a-SM-5HL75 5.8
GTEX-ZE7O-0011-R1a-SM-57WDM 5.0
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

87.7

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 87.7
FF:10153-102I9 76 years, female 131.0
FF:10169-103B7 60 years, female 72.8
FF:10374-105G5 89 years, female 59.2

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