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Gene name

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Method

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Detectable

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Score

Score

Antibodies

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TISSUE ATLAS PRIMARY DATA KIDNEY

GENE/PROTEIN

Antibody validation


Dictionary

Kidney

Tissue proteome

Kidney

KIDNEY - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:28.2TPM
GTEx:10.2RPKM
FANTOM5:41.1Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:Medium
Cells in tubules:Medium
 

Antibody staining

Antibody HPA045168

 

Antibody CAB000147

 

Antibody CAB003839

 

Antibody CAB003840

 

Antibody CAB075726

 

Antibody CAB075727

 

Cells in glomeruli

High   Not detected   Not detected   Medium   High   Medium  

Cells in tubules

High   Not detected   Not detected   Medium   High   Medium  
           
           
           

KIDNEY - HPA RNA-seq

Average TPM

28.2

overview Female, age 58
Sample 1
TPM: 32.6
Cell types%
Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15
overview Female, age 67
Sample 2
TPM: 25.9
Cell types%
Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 55
Sample 3
TPM: 32.6
Cell types%
Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5
overview Male, age 46
Sample 4
TPM: 28.3
Cell types%
Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10
overview Female, age 57
Sample 5
TPM: 18.1
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 6
TPM: 31.4
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20
overview Male, age 73
Sample 7
TPM: 19.6
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Female, age 59
Sample 8
TPM: 37.9
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15
overview Female, age 48
Sample 9
TPM: 27.5
Cell types%
Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM

10.2

GTEx sample id

RPKM

 

Kidney - Cortex

Kidney - Cortex
RPKM: 10.2
Samples: 32

Max RPKM: 22.9
Min RPKM: 4.3
Std RPKM: 3.8
Median RPKM: 9.7
GTEX-QLQW-1626-SM-4R1K1 22.9
GTEX-1399S-0526-SM-5IJG8 16.8
GTEX-ZYFG-1626-SM-5GZYY 16.6
GTEX-145MN-0326-SM-5QGQI 14.6
GTEX-13OVI-1126-SM-5KLZF 13.2
GTEX-ZVZP-0926-SM-5GIDB 12.7
GTEX-ZLFU-0926-SM-5P9F8 12.5
GTEX-147F4-2626-SM-5Q5CS 12.3
GTEX-12696-0926-SM-5FQTV 11.9
GTEX-XPVG-0526-SM-4B65N 11.5
GTEX-RN64-1626-SM-48FD7 11.1
GTEX-UPIC-1126-SM-4IHLO 10.9
GTEX-ZYT6-2226-SM-5GIC9 10.8
GTEX-P4QS-1126-SM-3NMD5 10.7
GTEX-12WSG-0826-SM-5EQ5A 10.4
GTEX-13RTJ-2226-SM-5S2Q1 9.7
GTEX-1497J-0826-SM-5NQAJ 9.6
GTEX-Y5V6-2026-SM-5IFHO 9.4
GTEX-13112-2126-SM-5GCO4 9.4
GTEX-N7MS-1626-SM-3LK5F 9.1
GTEX-11GS4-2326-SM-5A5KS 9.0
GTEX-13NYB-1726-SM-5N9G2 8.8
GTEX-QDVN-1626-SM-48TZC 8.6
GTEX-13OVL-1826-SM-5KLZR 8.4
GTEX-ZC5H-1726-SM-5HL7X 7.1
GTEX-11OF3-1326-SM-5N9FJ 6.8
GTEX-11TTK-1926-SM-5PNW8 5.8
GTEX-NPJ8-2226-SM-3TW8D 5.7
GTEX-T5JC-1526-SM-4DM68 5.7
GTEX-13O1R-2526-SM-5N9FW 5.6
GTEX-13OW6-1826-SM-5N9F9 5.1
GTEX-ZYFD-1526-SM-5NQ7T 4.3
Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million

41.1

FANTOM5 sample id

Sample description

Tags Per Million

Kidney
Tags Per Million: 41.1
FF:10017-101C8 60,62,63 years, female 41.1

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