Expression of SLC18B1 in cancer - Summary

CANCER ATLAS

Gene description

Solute carrier family 18, subfamily B, member 1

Protein class

Predicted intracellular proteins, Predicted membrane proteins, Transporters

Protein evidence

Evidence at protein level

Colorectal cancer

Breast cancer

Prostate cancer

Lung cancer

Liver cancer

STAINING SUMMARY

HPA029747

GENE INFORMATION
Gene name	SLC18B1 (HGNC Symbol)
Synonyms	C6orf192, dJ55C23.6
Description	Solute carrier family 18, subfamily B, member 1 (HGNC Symbol)
Entrez gene summary	This gene encodes a protein, which has high sequence similarity to rat, xenopus and zebrafish proteins. The protein function is unknown. [provided by RefSeq, Jul 2008]
Chromosome	6
Cytoband	q23.2
Chromosome location (bp)	132769370 - 132798553
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000146409 (version 83.38)
Entrez gene	116843
UniProt	Q6NT16 (UniProt - Evidence at protein level)
neXtProt	NX_Q6NT16
Antibodypedia	SLC18B1 antibodies

PROTEIN BROWSER

SLC18B1-001	SLC18B1-002

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
SLC18B1-001 ENSP00000275227 ENST00000275227	Q6NT16 [Direct mapping] MFS-type transporter SLC18B1 Show all	Transporters Electrochemical Potential-driven transporters Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based >9TM proteins predicted by MDM Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0016021 [integral component of membrane] GO:0055085 [transmembrane transport] Show all	456 aa 48.9 kDa	No	>9
SLC18B1-002 ENSP00000356895 ENST00000367918	Q5TBJ2 [Direct mapping] MFS-type transporter SLC18B1 Show all	Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0016021 [integral component of membrane] Show all	107 aa 11.3 kDa	No	0