Tissue expression of TRIM4 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	19.0	TPM
GTEx:	10.4	RPKM
FANTOM5:	30.4	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Chondrocytes:	Medium
Fibroblasts:	Medium
Peripheral nerve:	Medium
Adipocytes:	Low

Antibody staining	Antibody HPA019356	Antibody HPA029461
Chondrocytes	Medium
Fibroblasts	Low	Medium
Peripheral nerve	Low	Medium
Adipocytes	Low

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Low
Fibroblasts:	Medium
Peripheral nerve:	Low

Antibody staining	Antibody HPA019356	Antibody HPA029461
Adipocytes	Medium	Not detected
Fibroblasts	Medium	Medium
Peripheral nerve	Medium	Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	19.0

Female, age 80

Sample 1
TPM: 18.4

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 19.9

Female, age 57

Sample 3
TPM: 17.4

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 21.9

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 17.6

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	10.4

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 11.1

Samples: 350

Max RPKM: 17.5
Min RPKM: 5.4
Std RPKM: 2.1
Median RPKM: 11

GTEX-RVPU-2326-SM-2TF6R

17.5

GTEX-TSE9-0226-SM-3DB84

17.0

GTEX-13FHP-0226-SM-5K7WD

16.3

GTEX-YFCO-2026-SM-4W21Q

16.3

GTEX-PLZ5-1826-SM-3NB22

16.1

GTEX-W5X1-2626-SM-4LMI8

15.8

GTEX-OHPK-0226-SM-3MJH6

15.7

GTEX-UJHI-1626-SM-3DB9A

15.5

Show all

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 9.4

Samples: 227

Max RPKM: 18
Min RPKM: 4.7
Std RPKM: 2.4
Median RPKM: 9.2

GTEX-145ME-0726-SM-5O9A3

18.0

GTEX-W5X1-1426-SM-3GIKH

15.9

GTEX-11DYG-2026-SM-5EGGX

15.6

GTEX-X3Y1-0926-SM-3P5YT

15.1

GTEX-13S7M-0826-SM-5QGQX

14.2

GTEX-ZG7Y-1626-SM-5S2NO

14.1

GTEX-UPK5-1826-SM-3GAEB

13.9

GTEX-WHWD-0826-SM-3LK6R

13.9

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	30.4

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 30.4

FF:10010-101C1

65,65,76 years, mixed

30.4