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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:20.3TPM
GTEx:6.0RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Low
Neuropil:Medium
 

Antibody staining

Antibody HPA024764

 

Antibody HPA053068

 

Antibody CAB025900

 

Endothelial cells

Not detected   Low   Low  

Glial cells

Not detected   Not detected   Low  

Neuronal cells

Low   Low   Low  

Neuropil

Medium   Not detected   Medium  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

20.3

N/A Male, age 5
Sample 1
TPM: 28.2
overview Female, age 40
Sample 2
TPM: 7.6
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 25.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

6.0

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 5.1
Samples: 114

Max RPKM: 13
Min RPKM: 0.2
Std RPKM: 2.4
Median RPKM: 4.9
GTEX-13NYC-2826-SM-5K7WR 13.0
GTEX-WWYW-3126-SM-3NB39 11.7
GTEX-13NYS-3126-SM-5KLYV 9.9
GTEX-11O72-2926-SM-5BC4V 9.6
GTEX-ZAK1-3026-SM-5S2MJ 9.3
GTEX-PVOW-2526-SM-2XCF7 9.1
GTEX-WVLH-3026-SM-3MJG9 9.0
GTEX-X4XX-3026-SM-3NMB2 8.7
GTEX-ZUA1-3026-SM-59HJC 8.6
GTEX-X585-3026-SM-46MWF 8.5
GTEX-14BMV-3026-SM-5S2PQ 8.3
GTEX-TSE9-3026-SM-3DB76 8.3
GTEX-UTHO-3026-SM-3GAFB 8.3
GTEX-132Q8-3026-SM-5PNVG 8.2
GTEX-QVJO-1426-SM-2S1QY 8.2
GTEX-131YS-3126-SM-5KLYT 8.0
GTEX-Y8DK-0826-SM-4TT3T 8.0
GTEX-RNOR-2326-SM-2TF4I 7.9
GTEX-T6MN-2626-SM-32PMQ 7.8
GTEX-T2IS-3026-SM-32QPM 7.7
GTEX-11DXY-3226-SM-5GIDE 7.4
GTEX-145LS-3126-SM-5Q5BY 7.4
GTEX-11NUK-2926-SM-5A5MD 7.3
GTEX-WZTO-2926-SM-3NM9I 7.3
GTEX-14ASI-3026-SM-5S2PN 7.0
GTEX-1128S-2726-SM-5H12C 6.7
GTEX-13FXS-3126-SM-5J2NN 6.7
GTEX-T5JC-2426-SM-3NMDB 6.7
GTEX-12WSH-3026-SM-5CVNI 6.6
GTEX-RU72-3026-SM-5SI7Y 6.5
GTEX-XLM4-3026-SM-4AT6L 6.5
GTEX-11PRG-2926-SM-5987A 6.4
GTEX-QMR6-1426-SM-32PLA 6.2
GTEX-11DXW-1126-SM-5H12Q 6.1
GTEX-12ZZZ-3026-SM-5BC67 6.1
GTEX-13O3Q-2926-SM-5KM45 6.1
GTEX-R55F-1326-SM-5S2V4 6.1
GTEX-145MH-3026-SM-5Q5DZ 6.0
GTEX-13OW6-3026-SM-5J2MI 5.9
GTEX-Z93S-2926-SM-57WB9 5.9
GTEX-117XS-3026-SM-5N9CA 5.6
GTEX-11GSO-2926-SM-5HL73 5.5
GTEX-13OVH-3026-SM-5MR4N 5.5
GTEX-WL46-2926-SM-3LK82 5.5
GTEX-YFC4-3126-SM-5PNV6 5.5
GTEX-13JVG-3126-SM-5L3FH 5.4
GTEX-13VXU-2926-SM-5LU5C 5.4
GTEX-12ZZX-2926-SM-5GCOQ 5.3
GTEX-1399T-3026-SM-5KLZC 5.3
GTEX-ZYFD-3026-SM-5E44C 5.3
GTEX-12126-1026-SM-5P9JJ 5.2
GTEX-1192X-3126-SM-5N9BY 5.1
GTEX-145MF-2726-SM-5O995 5.1
GTEX-145MG-3026-SM-5RQJA 5.1
GTEX-YJ89-3026-SM-5IFJI 5.1
GTEX-Q2AG-2926-SM-2HMJ3 5.0
GTEX-111FC-3126-SM-5GZZ2 4.9
GTEX-11ZUS-2926-SM-5FQSL 4.9
GTEX-12WSC-3026-SM-5GCNF 4.9
GTEX-13QIC-2926-SM-5J2NF 4.9
GTEX-13FHO-3026-SM-5J1O9 4.8
GTEX-13O3O-3126-SM-5KM3H 4.8
GTEX-14A5I-2926-SM-5Q5CQ 4.8
GTEX-13SLX-3126-SM-5S2Q5 4.7
GTEX-NPJ8-1526-SM-2D7VU 4.7
GTEX-11ONC-2926-SM-5P9JM 4.4
GTEX-13S7M-3126-SM-5RQJQ 4.4
GTEX-OXRN-2426-SM-2I5EQ 4.4
GTEX-ZVT3-3026-SM-5E43N 4.4
GTEX-13PL6-3126-SM-5LUAR 4.3
GTEX-144GL-3026-SM-5Q5CW 4.2
GTEX-11EI6-3026-SM-5GZZO 4.1
GTEX-12ZZW-2926-SM-5LZUP 4.1
GTEX-QDT8-2926-SM-32PKC 4.1
GTEX-1313W-3126-SM-5LZUI 4.0
GTEX-13FHP-3026-SM-5IJBS 4.0
GTEX-13FLW-1426-SM-5K7YE 3.9
GTEX-13OW8-2826-SM-5L3GC 3.9
GTEX-13X6J-3026-SM-5Q5CU 3.9
GTEX-WHSE-3026-SM-3P5ZH 3.7
GTEX-ZZPT-3026-SM-5GZXH 3.7
GTEX-11GS4-3126-SM-5A5LH 3.6
GTEX-11OC5-0726-SM-5P9JK 3.5
GTEX-13NYB-3026-SM-5IJD7 3.5
GTEX-12ZZY-3026-SM-5GCOU 3.4
GTEX-QVUS-2826-SM-3GADB 3.4
GTEX-NPJ7-2726-SM-2I3FT 3.3
GTEX-XOTO-3026-SM-4B65M 3.2
GTEX-ZAJG-3126-SM-5HL9J 3.2
GTEX-Y111-2726-SM-4TT3N 3.1
GTEX-13OW7-3026-SM-5L3GY 3.0
GTEX-ZE7O-3126-SM-5HL5X 2.9
GTEX-1117F-3226-SM-5N9CT 2.8
GTEX-11WQK-3026-SM-5EQL6 2.5
GTEX-131XW-3126-SM-5LZUC 2.5
GTEX-PWO3-0926-SM-2I5EY 2.4
GTEX-11EMC-3226-SM-5EGKW 2.2
GTEX-13IVO-2926-SM-5L3CZ 2.2
GTEX-11GSP-3226-SM-5986O 2.0
GTEX-139T8-1026-SM-5J2MC 2.0
GTEX-11TTK-2926-SM-5PNYP 1.9
GTEX-13X6K-2926-SM-5Q5D5 1.9
GTEX-11NV4-2126-SM-5N9DS 1.8
GTEX-12WSD-3126-SM-5HL7P 1.8
GTEX-13G51-3026-SM-5IJB8 1.8
GTEX-N7MT-1126-SM-5SI7V 1.7
GTEX-13OVJ-2826-SM-5L3GW 1.6
GTEX-144FL-3026-SM-5O99C 1.6
GTEX-147GR-3026-SM-5S2ML 1.6
GTEX-13PVQ-3026-SM-5SI93 1.4
GTEX-13JUV-2926-SM-5LZX7 1.2
GTEX-12WSA-2926-SM-5EQ4D 0.5
GTEX-1445S-3026-SM-5O9BR 0.4
GTEX-11OF3-2926-SM-5HL78 0.2
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 6.9
Samples: 108

Max RPKM: 16.5
Min RPKM: 0.5
Std RPKM: 3.7
Median RPKM: 7
GTEX-T6MN-0011-R10A-SM-32QP7 16.5
GTEX-X585-0011-R10A-SM-46MUY 16.0
GTEX-X4XX-0011-R10B-SM-46MWO 15.2
GTEX-Y8DK-0011-R10A-SM-4SOK1 14.2
GTEX-13O3Q-0011-R10b-SM-5KM39 13.4
GTEX-WL46-0011-R10A-SM-3MJFQ 13.4
GTEX-S7SE-0011-R10A-SM-2XCDF 12.7
GTEX-Q2AG-0011-R10A-SM-2HMLA 12.6
GTEX-WWYW-0011-R10A-SM-3NB35 12.0
GTEX-NL3H-0011-R10A-SM-2I3E9 11.8
GTEX-QVJO-0011-R10A-SM-2S1QJ 11.4
GTEX-13NYS-0011-R10a-SM-5MR4S 11.2
GTEX-14ASI-0011-R10b-SM-5S2VZ 11.0
GTEX-131YS-0011-R10b-SM-5EQ5N 10.9
GTEX-14BIN-0011-R10a-SM-5S2UA 10.8
GTEX-12WSE-0011-R10b-SM-5P9JV 10.6
GTEX-12WSF-0011-R10a-SM-5LZVH 10.6
GTEX-13S7M-0011-R10b-SM-5PNZB 10.6
GTEX-NPJ7-0011-R10A-SM-2I3E5 10.6
GTEX-WVLH-0011-R10A-SM-3MJFM 10.5
GTEX-ZF28-0011-R10a-SM-4WWEH 10.3
GTEX-132Q8-0011-R10b-SM-5DUWZ 10.2
GTEX-145MG-0011-R10a-SM-5PNWG 10.0
GTEX-QDT8-0011-R10A-SM-32PKG 9.9
GTEX-WZTO-0011-R10B-SM-4E3KB 9.9
GTEX-12ZZZ-0011-R10a-SM-5P9HC 9.8
GTEX-12WSH-0011-R10a-SM-5LZUS 9.7
GTEX-N7MS-0011-R10A-SM-2HMJK 9.6
GTEX-XLM4-0011-R10A-SM-4AT5P 9.3
GTEX-QVUS-0011-R10A-SM-3GIK3 9.2
GTEX-X4EP-0011-R10B-SM-4QASJ 9.2
GTEX-ZUA1-0011-R10a-SM-51MT6 9.2
GTEX-145LS-0011-R10a-SM-5PNUQ 9.0
GTEX-QMR6-0011-R10A-SM-32PKO 9.0
GTEX-145MH-0011-R10b-SM-5PNUK 8.9
GTEX-1313W-0011-R10b-SM-5DUXA 8.8
GTEX-12ZZX-0011-R10b-SM-5DUWK 8.6
GTEX-13X6K-0011-R10a-SM-5P9JR 8.6
GTEX-ZAB4-0011-R10a-SM-4SOKH 8.6
GTEX-12ZZY-0011-R10b-SM-5HL7W 8.5
GTEX-YJ89-0011-R10a-SM-4SOK9 8.5
GTEX-NPJ8-0011-R10A-SM-2YUMO 8.3
GTEX-T5JC-0011-R10A-SM-32PM2 8.3
GTEX-12WSM-0011-R10a-SM-5DUWV 8.2
GTEX-YFC4-0011-R10a-SM-4SOK5 8.2
GTEX-13CZV-0011-R10b-SM-5LZYD 8.0
GTEX-13QIC-0011-R10a-SM-5O9C7 8.0
GTEX-ZVT3-0011-R10b-SM-57WB6 7.8
GTEX-13OW6-0011-R10a-SM-5L3HE 7.6
GTEX-131XH-0011-R10a-SM-5EGLJ 7.4
GTEX-13FXS-0011-R10a-SM-5J2MA 7.2
GTEX-14BIL-0011-R10a-SM-5SI75 7.1
GTEX-11H98-0011-R10b-SM-5NQ98 7.0
GTEX-13NYB-0011-R10a-SM-5KM43 7.0
GTEX-13RTJ-0011-R10b-SM-5O9CW 7.0
GTEX-12WSC-0011-R10a-SM-5GU57 6.7
GTEX-13OW7-0011-R10a-SM-5L3H3 6.7
GTEX-13X6J-0011-R10b-SM-5PNWA 6.7
GTEX-OXRN-0011-R10A-SM-2I5GC 6.4
GTEX-TSE9-0011-R10A-SM-3DB7O 6.3
GTEX-13FHO-0011-R10b-SM-5J2MM 6.2
GTEX-13FLW-0011-R10b-SM-5LZZF 6.2
GTEX-147GR-0011-R10b-SM-5S2UM 6.2
GTEX-145LU-0011-R10a-SM-5PNWJ 6.0
GTEX-147F4-0011-R10b-SM-5S2WC 5.9
GTEX-13G51-0011-R10b-SM-5LZYF 5.6
GTEX-ZDXO-0011-R10a-SM-4WWD8 5.5
GTEX-ZVZQ-0011-R10b-SM-51MRT 5.5
GTEX-13N1W-0011-R10b-SM-5MR4H 5.3
GTEX-13OVL-0011-R10a-SM-5L3GS 5.2
GTEX-13SLX-0011-R10a-SM-5P9HV 5.2
GTEX-11ZUS-0011-R10b-SM-5BC79 5.1
GTEX-13OW8-0011-R10a-SM-5L3H6 5.0
GTEX-13O3O-0011-R10a-SM-5LUA9 4.9
GTEX-13X6I-0011-R10a-SM-5PNWI 4.9
GTEX-Z93S-0011-R10a-SM-4RGNM 4.9
GTEX-N7MT-0011-R10A-SM-2I3E1 4.8
GTEX-12126-0011-R10b-SM-5BC6T 4.7
GTEX-13JUV-0011-R10b-SM-5LZXR 4.6
GTEX-11WQC-0011-R10a-SM-57WCT 4.0
GTEX-P44H-0011-R10A-SM-2XCEK 4.0
GTEX-ZXG5-0011-R10a-SM-57WDD 3.7
GTEX-139TS-0011-R10a-SM-5K7TU 3.4
GTEX-13SLW-0011-R10a-SM-5S2UI 3.4
GTEX-13FTZ-0011-R10b-SM-5KLZS 3.2
GTEX-13QJC-0011-R10a-SM-5SI63 3.1
GTEX-13FLV-0011-R10b-SM-5LZZ2 3.0
GTEX-NL4W-0011-R10A-SM-2I3DY 3.0
GTEX-11WQK-0011-R10a-SM-5BC6R 2.9
GTEX-X261-0011-R10B-SM-4E3JT 2.9
GTEX-OXRO-0011-R10A-SM-2I5EH 2.8
GTEX-12ZZW-0011-R10b-SM-5HL9X 2.7
GTEX-RVPU-0011-R10A-SM-2XCAH 2.6
GTEX-13NZA-0011-R10b-SM-5KM54 2.3
GTEX-11GSP-0011-R10a-SM-5NQ7J 2.0
GTEX-12WSD-0011-R10b-SM-5GU79 2.0
GTEX-13IVO-0011-R10a-SM-5LZY3 2.0
GTEX-13N2G-0011-R10a-SM-5MR34 2.0
GTEX-XMD1-0011-R10A-SM-4AT4A 1.7
GTEX-13OVJ-0011-R10b-SM-5L3HT 1.6
GTEX-14753-0011-R10b-SM-5S2WE 1.1
GTEX-13JVG-0011-R10b-SM-5KM2P 1.0
GTEX-1477Z-0011-R10b-SM-5S2RF 1.0
GTEX-ZE7O-0011-R10a-SM-57WAZ 0.8
GTEX-ZV68-0011-R10a-SM-51MT7 0.8
GTEX-12WSA-0011-R10b-SM-5P9ET 0.7
GTEX-131XW-0011-R10a-SM-5DUVA 0.5
GTEX-1445S-0011-R10a-SM-5PNWB 0.5
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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