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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:513.9TPM
GTEx:243.7RPKM
FANTOM5:1525.9Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Low
Myoepithelial cells:Not detected
 

Antibody staining

Antibody HPA054026

 

Antibody CAB010823

 

Antibody CAB016728

 

Antibody CAB036009

 

Adipocytes

Not detected   Not detected   Not detected   Not detected  

Glandular cells

Medium   Low   Low  

Myoepithelial cells

Medium   Not detected   Medium  
       
       
       

BREAST - HPA RNA-seq

Average TPM

513.9

overview Female, age 52
Sample 1
TPM: 512.5
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 1232.9
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 114.7
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 195.5
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

243.7

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 243.7
Samples: 214

Max RPKM: 828.3
Min RPKM: 45.6
Std RPKM: 135.3
Median RPKM: 212.6
GTEX-ZQUD-1926-SM-51MSA 828.3
GTEX-13O61-1826-SM-5KM4I 724.0
GTEX-YEC3-1026-SM-5IFI5 714.0
GTEX-YFCO-1826-SM-4W1YH 669.6
GTEX-13FTW-1426-SM-5LZWZ 594.3
GTEX-11ZUS-0826-SM-5FQUY 588.6
GTEX-XQ8I-2426-SM-4WAXY 584.0
GTEX-ZA64-1526-SM-5CVMD 572.6
GTEX-XGQ4-0926-SM-4AT4U 555.9
GTEX-WFON-1826-SM-3GILG 546.6
GTEX-R55D-0826-SM-48FEA 541.7
GTEX-11NSD-0926-SM-5N9DR 487.6
GTEX-ZDYS-1126-SM-5K7UB 483.3
GTEX-13N1W-0626-SM-5MR4U 480.5
GTEX-132NY-0826-SM-5K7Y7 473.1
GTEX-145MN-1926-SM-5SIAI 470.8
GTEX-Y9LG-1426-SM-5IFJZ 461.4
GTEX-XMK1-1126-SM-4IHJ8 458.2
GTEX-Y5V6-2126-SM-4WWFX 455.1
GTEX-12BJ1-1826-SM-5HL9N 452.5
GTEX-S4UY-0726-SM-4AD6X 448.4
GTEX-ZZ64-1226-SM-5E43R 428.5
GTEX-ZDTT-2126-SM-5S2OJ 425.3
GTEX-11OF3-1926-SM-59889 409.7
GTEX-11P82-1326-SM-5HL62 408.6
GTEX-139TU-0626-SM-5KM3X 408.2
GTEX-139T6-1626-SM-5PNYZ 403.4
GTEX-ZT9W-2026-SM-51MRA 401.2
GTEX-13FTX-1126-SM-5N9EN 399.7
GTEX-11DXZ-1926-SM-5GZZL 396.3
GTEX-144GL-2026-SM-5LU3O 391.2
GTEX-ZQG8-0726-SM-5P9H9 383.6
GTEX-14E6E-1326-SM-5S2NR 377.2
GTEX-12KS4-0126-SM-5Q5A5 369.7
GTEX-PSDG-1626-SM-48TCQ 369.4
GTEX-RWS6-1926-SM-47JXY 368.1
GTEX-11ZTT-2326-SM-5EQLG 360.0
GTEX-Y3I4-1526-SM-4TT7K 348.3
GTEX-12WSM-1726-SM-5BC6J 343.1
GTEX-S7SE-0826-SM-4AT4D 338.9
GTEX-14753-2426-SM-5LU8U 334.7
GTEX-ZYT6-0126-SM-5E45J 329.5
GTEX-TKQ1-0226-SM-33HB5 328.9
GTEX-REY6-2426-SM-48FF5 326.1
GTEX-Y8E4-1626-SM-5S2MW 324.8
GTEX-ZVT4-1026-SM-57WC4 319.5
GTEX-XBED-1626-SM-47JYN 319.3
GTEX-XUJ4-1926-SM-4BOOV 317.1
GTEX-XQ3S-1326-SM-4BOPQ 314.5
GTEX-T6MO-0326-SM-32QOK 307.3
GTEX-11ONC-2126-SM-5HL6E 307.1
GTEX-ZLFU-2126-SM-4WWEV 304.4
GTEX-145ME-1526-SM-5Q5F2 303.9
GTEX-YJ8O-2226-SM-5IFHW 296.7
GTEX-13PVQ-1026-SM-5KM3M 295.6
GTEX-ZV6S-1826-SM-5NQ8D 293.8
GTEX-QVJO-1826-SM-447C9 291.8
GTEX-13O3O-0826-SM-5K7WE 289.3
GTEX-11DXY-2326-SM-5GICW 288.1
GTEX-11EI6-0626-SM-5985T 285.0
GTEX-Y5V5-2126-SM-4WWFO 283.5
GTEX-ZLV1-1426-SM-4WWES 279.2
GTEX-12WSN-1326-SM-5GCNT 278.1
GTEX-WXYG-2226-SM-4E3IM 277.9
GTEX-S33H-0326-SM-4AD6N 277.8
GTEX-1122O-1226-SM-5H113 277.3
GTEX-ZDXO-0126-SM-5S2ND 277.0
GTEX-XYKS-1326-SM-4BRUN 274.8
GTEX-13D11-1026-SM-5IJFB 273.2
GTEX-ZUA1-1526-SM-59HLS 269.5
GTEX-R53T-1526-SM-48FEK 269.2
GTEX-TKQ2-1826-SM-33HB2 269.0
GTEX-XUW1-2326-SM-4BOO5 268.5
GTEX-YB5K-1626-SM-5IFIN 268.5
GTEX-UJHI-1426-SM-3DB9C 261.3
GTEX-S4Q7-1126-SM-4AD6R 260.7
GTEX-144GM-0926-SM-5O994 259.8
GTEX-U412-1826-SM-4DXTJ 258.8
GTEX-11NV4-2026-SM-5N9DG 258.4
GTEX-11EQ9-1826-SM-5Q5AJ 254.8
GTEX-11O72-2126-SM-5N9FO 254.7
GTEX-131YS-0626-SM-5EGKL 254.3
GTEX-WRHU-0326-SM-3MJFY 254.1
GTEX-1399U-1826-SM-5PNZ1 249.1
GTEX-Y114-2026-SM-4TT7L 241.9
GTEX-ZPIC-1126-SM-5BC7F 241.0
GTEX-X4XY-0926-SM-4E3JD 240.9
GTEX-ZZPU-0626-SM-5E43T 239.5
GTEX-11LCK-2426-SM-5HL5F 239.4
GTEX-S32W-2026-SM-4AD6E 236.3
GTEX-YB5E-1726-SM-5IFJ3 234.8
GTEX-11I78-2226-SM-5PNYA 234.5
GTEX-1211K-1926-SM-5EQLB 232.4
GTEX-T6MN-0726-SM-32PML 228.1
GTEX-12WSB-0626-SM-59HJO 227.6
GTEX-13O3Q-2226-SM-5KM4O 224.0
GTEX-11GSO-1926-SM-5A5K3 223.4
GTEX-RUSQ-2026-SM-4GIAK 222.1
GTEX-ZV7C-1826-SM-5NQ83 222.0
GTEX-U3ZN-1926-SM-4DXSG 218.6
GTEX-117XS-1926-SM-5GICO 216.8
GTEX-VUSG-2226-SM-4KKZO 216.6
GTEX-WYJK-1326-SM-3NB2T 215.9
GTEX-Y8LW-1626-SM-5IFHX 215.3
GTEX-11TUW-1826-SM-5BC5D 214.8
GTEX-ZU9S-1926-SM-5NQBP 214.6
GTEX-WY7C-2726-SM-3NB3P 213.3
GTEX-ZYFC-0826-SM-5E44K 211.9
GTEX-ZVTK-0326-SM-51MRR 210.5
GTEX-11WQC-1726-SM-5GU4W 210.4
GTEX-X261-0626-SM-3NMD9 209.3
GTEX-UPK5-2326-SM-3P5Z8 205.8
GTEX-117YX-1426-SM-5H12H 196.8
GTEX-145MO-0826-SM-5NQBL 195.6
GTEX-S4P3-1326-SM-4AD6V 195.4
GTEX-11GS4-2126-SM-5A5KR 193.4
GTEX-1313W-0826-SM-5EQ4T 190.5
GTEX-TML8-1226-SM-32QON 188.3
GTEX-133LE-1726-SM-5K7VQ 187.8
GTEX-QMRM-1626-SM-4R1KV 187.8
GTEX-SE5C-2126-SM-4BRUJ 187.6
GTEX-146FH-0826-SM-5SI8T 180.4
GTEX-ZWKS-2826-SM-5NQ74 180.4
GTEX-ZY6K-1626-SM-5GZWV 177.0
GTEX-ZEX8-2226-SM-57WC6 176.3
GTEX-13N11-1726-SM-5J1OJ 175.1
GTEX-13OW8-0226-SM-5K7UP 175.1
GTEX-13W46-0826-SM-5LU3H 174.8
GTEX-X15G-1626-SM-3NMB3 174.5
GTEX-13S86-1226-SM-5S2OA 171.3
GTEX-ZVZQ-0826-SM-51MRF 171.1
GTEX-13NZ8-0126-SM-5IJCT 170.3
GTEX-UTHO-1026-SM-3GAF7 169.0
GTEX-QDT8-0626-SM-48TYW 166.5
GTEX-147F4-2826-SM-5NQBN 166.1
GTEX-ZAB4-2526-SM-5HL8M 164.9
GTEX-12WSK-2226-SM-5GCO5 163.6
GTEX-S341-1526-SM-4AD6K 163.4
GTEX-Y111-2026-SM-4SOJA 162.9
GTEX-T5JC-2126-SM-32PMO 162.5
GTEX-11EM3-1326-SM-5N9C6 162.1
GTEX-ZF3C-2326-SM-5S2MZ 161.8
GTEX-ZYWO-2326-SM-5GZY4 161.1
GTEX-11P7K-0726-SM-5EGKX 160.3
GTEX-11DXW-0626-SM-5N9ER 159.6
GTEX-13NZB-2126-SM-5MR4Y 159.3
GTEX-XMD2-0926-SM-4WWEF 159.0
GTEX-ZTX8-1226-SM-4YCE9 158.9
GTEX-XMD1-0826-SM-4AT52 158.1
GTEX-11TT1-2126-SM-5GU5Y 157.1
GTEX-U8XE-0826-SM-4E3J1 156.7
GTEX-13113-1726-SM-5GCOO 155.9
GTEX-XV7Q-2326-SM-4BRVZ 155.6
GTEX-13W3W-1226-SM-5LU4H 154.6
GTEX-1314G-1226-SM-5BC6D 154.4
GTEX-ZYW4-0826-SM-5GIDG 153.6
GTEX-Y3IK-2326-SM-4WWDT 152.3
GTEX-Q2AG-0326-SM-48U1O 152.1
GTEX-U3ZH-1426-SM-4DXSR 151.7
GTEX-WYBS-0926-SM-3NM94 150.6
GTEX-1192X-2326-SM-5987X 148.4
GTEX-WOFL-0826-SM-3MJG1 147.9
GTEX-13CF2-2026-SM-5K7VI 147.4
GTEX-RU72-0626-SM-46MUI 147.2
GTEX-T2YK-2226-SM-32QPT 147.2
GTEX-13CF3-2126-SM-5IFJP 144.2
GTEX-X4EP-2926-SM-3P5YQ 141.0
GTEX-T2IS-1526-SM-32QPR 139.7
GTEX-TMMY-0726-SM-33HBE 138.6
GTEX-13NZ9-1026-SM-5MR5K 137.2
GTEX-WI4N-1426-SM-3LK7H 136.3
GTEX-QEL4-2126-SM-447AE 135.4
GTEX-11PRG-0826-SM-5EQ6A 134.5
GTEX-1269C-2426-SM-5FQSN 133.3
GTEX-11P81-1926-SM-5BC53 132.3
GTEX-111YS-1926-SM-5GICC 131.6
GTEX-145LT-0726-SM-5S2VM 130.2
GTEX-R55F-1726-SM-2TF4R 130.2
GTEX-VJWN-0726-SM-3GIJ8 130.0
GTEX-13O3P-0826-SM-5L3DH 129.1
GTEX-ZTTD-1026-SM-51MRD 128.3
GTEX-11EMC-2026-SM-5A5JV 128.0
GTEX-XOT4-0726-SM-4GIAW 127.6
GTEX-12ZZX-1126-SM-5EGKB 127.3
GTEX-13QIC-2326-SM-5LU5N 126.0
GTEX-ZVT2-1826-SM-5NQ8W 124.7
GTEX-ZF29-1926-SM-5S2P1 122.5
GTEX-14ABY-2126-SM-5QGQZ 122.0
GTEX-13PL6-2926-SM-5L3I2 119.9
GTEX-131XW-0726-SM-5EGK3 116.7
GTEX-ZF2S-2026-SM-5E461 115.3
GTEX-1117F-2826-SM-5GZXL 114.2
GTEX-YFC4-1426-SM-5IFJG 114.1
GTEX-14AS3-1626-SM-5S2OY 112.6
GTEX-13OW5-2226-SM-5L3HC 112.1
GTEX-R3RS-0626-SM-48FE1 111.8
GTEX-Y5LM-1726-SM-4VDSX 107.7
GTEX-11WQK-2426-SM-5GU5C 106.2
GTEX-132AR-0826-SM-5EGK6 105.2
GTEX-ZXES-0826-SM-5E43C 103.7
GTEX-WYVS-1726-SM-3NMAY 103.5
GTEX-ZAJG-0626-SM-5HL8X 102.8
GTEX-13FHO-0826-SM-5L3E8 101.4
GTEX-139T8-0826-SM-5L3DE 97.6
GTEX-ZC5H-2626-SM-5J2MG 95.2
GTEX-132Q8-1426-SM-5EGK7 94.2
GTEX-11DZ1-0326-SM-5N9BN 85.5
GTEX-W5X1-2326-SM-3GIL6 78.6
GTEX-ZVE2-1226-SM-5NQ8R 77.3
GTEX-SIU7-1626-SM-4BRUK 75.3
GTEX-T5JW-2026-SM-4DM63 74.0
GTEX-QEG5-0726-SM-4R1JQ 73.9
GTEX-13FTY-2226-SM-5J1ND 65.8
GTEX-XUZC-1626-SM-4BRVP 45.6
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

1525.9

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 1525.9
FF:10080-102A8 77 years, female 1525.9

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