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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:200.0TPM
GTEx:16.4RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Medium
Neuronal cells:Not detected
Neuropil:Low
 

Antibody staining

Antibody HPA054026

 

Antibody CAB010823

 

Antibody CAB016728

 

Antibody CAB036009

 

Endothelial cells

Medium   Not detected   Not detected   Medium  

Glial cells

Low   Medium   High   Medium  

Neuronal cells

Not detected   Not detected   Not detected   Not detected  

Neuropil

Medium   Medium   Medium   Low  
       
       
       

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

200.0

N/A Male, age 5
Sample 1
TPM: 126.5
overview Female, age 40
Sample 2
TPM: 154.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 318.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

16.4

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 17.8
Samples: 114

Max RPKM: 61
Min RPKM: 5.3
Std RPKM: 9
Median RPKM: 16.1
GTEX-13G51-3026-SM-5IJB8 61.0
GTEX-144FL-3026-SM-5O99C 42.9
GTEX-1192X-3126-SM-5N9BY 40.8
GTEX-13OVJ-2826-SM-5L3GW 39.8
GTEX-NPJ8-1526-SM-2D7VU 36.1
GTEX-12ZZY-3026-SM-5GCOU 36.0
GTEX-13JVG-3126-SM-5L3FH 35.5
GTEX-139T8-1026-SM-5J2MC 33.3
GTEX-13PVQ-3026-SM-5SI93 32.8
GTEX-13FHO-3026-SM-5J1O9 31.3
GTEX-13OW8-2826-SM-5L3GC 30.7
GTEX-12WSA-2926-SM-5EQ4D 29.8
GTEX-11GS4-3126-SM-5A5LH 29.7
GTEX-N7MT-1126-SM-5SI7V 29.5
GTEX-13JUV-2926-SM-5LZX7 29.2
GTEX-QVUS-2826-SM-3GADB 29.0
GTEX-ZZPT-3026-SM-5GZXH 27.8
GTEX-11ONC-2926-SM-5P9JM 27.5
GTEX-13FHP-3026-SM-5IJBS 26.6
GTEX-111FC-3126-SM-5GZZ2 25.9
GTEX-132Q8-3026-SM-5PNVG 25.8
GTEX-11GSP-3226-SM-5986O 24.8
GTEX-1117F-3226-SM-5N9CT 24.5
GTEX-1445S-3026-SM-5O9BR 23.1
GTEX-1313W-3126-SM-5LZUI 21.8
GTEX-NPJ7-2726-SM-2I3FT 21.6
GTEX-11EMC-3226-SM-5EGKW 20.6
GTEX-X585-3026-SM-46MWF 20.6
GTEX-QDT8-2926-SM-32PKC 20.5
GTEX-WHSE-3026-SM-3P5ZH 20.5
GTEX-11TTK-2926-SM-5PNYP 20.0
GTEX-WZTO-2926-SM-3NM9I 20.0
GTEX-13NYB-3026-SM-5IJD7 19.7
GTEX-QVJO-1426-SM-2S1QY 19.5
GTEX-11WQK-3026-SM-5EQL6 19.3
GTEX-12WSD-3126-SM-5HL7P 19.1
GTEX-13FLW-1426-SM-5K7YE 19.1
GTEX-1399T-3026-SM-5KLZC 18.7
GTEX-13X6K-2926-SM-5Q5D5 18.6
GTEX-14A5I-2926-SM-5Q5CQ 18.3
GTEX-XLM4-3026-SM-4AT6L 18.1
GTEX-QMR6-1426-SM-32PLA 18.0
GTEX-13IVO-2926-SM-5L3CZ 17.9
GTEX-T6MN-2626-SM-32PMQ 17.8
GTEX-13OW7-3026-SM-5L3GY 17.6
GTEX-13S7M-3126-SM-5RQJQ 17.5
GTEX-XOTO-3026-SM-4B65M 17.2
GTEX-12ZZW-2926-SM-5LZUP 17.1
GTEX-11GSO-2926-SM-5HL73 16.9
GTEX-11EI6-3026-SM-5GZZO 16.8
GTEX-131XW-3126-SM-5LZUC 16.8
GTEX-145LS-3126-SM-5Q5BY 16.8
GTEX-ZE7O-3126-SM-5HL5X 16.8
GTEX-Q2AG-2926-SM-2HMJ3 16.6
GTEX-ZAJG-3126-SM-5HL9J 16.5
GTEX-X4XX-3026-SM-3NMB2 16.3
GTEX-13QIC-2926-SM-5J2NF 16.2
GTEX-13OVH-3026-SM-5MR4N 16.0
GTEX-YFC4-3126-SM-5PNV6 15.9
GTEX-11DXY-3226-SM-5GIDE 15.8
GTEX-12ZZZ-3026-SM-5BC67 15.7
GTEX-13OW6-3026-SM-5J2MI 15.5
GTEX-RU72-3026-SM-5SI7Y 14.7
GTEX-WL46-2926-SM-3LK82 14.7
GTEX-ZVT3-3026-SM-5E43N 14.3
GTEX-11OC5-0726-SM-5P9JK 14.2
GTEX-13NYS-3126-SM-5KLYV 14.2
GTEX-11NUK-2926-SM-5A5MD 13.8
GTEX-1128S-2726-SM-5H12C 13.6
GTEX-Y111-2726-SM-4TT3N 13.6
GTEX-PWO3-0926-SM-2I5EY 13.5
GTEX-145MG-3026-SM-5RQJA 13.4
GTEX-145MF-2726-SM-5O995 13.3
GTEX-147GR-3026-SM-5S2ML 13.3
GTEX-UTHO-3026-SM-3GAFB 13.3
GTEX-ZAK1-3026-SM-5S2MJ 13.0
GTEX-117XS-3026-SM-5N9CA 12.4
GTEX-OXRN-2426-SM-2I5EQ 12.0
GTEX-11NV4-2126-SM-5N9DS 11.9
GTEX-12WSC-3026-SM-5GCNF 11.8
GTEX-14BMV-3026-SM-5S2PQ 11.8
GTEX-14ASI-3026-SM-5S2PN 11.7
GTEX-13VXU-2926-SM-5LU5C 11.5
GTEX-Y8DK-0826-SM-4TT3T 11.4
GTEX-YJ89-3026-SM-5IFJI 11.4
GTEX-11DXW-1126-SM-5H12Q 11.2
GTEX-13NYC-2826-SM-5K7WR 11.2
GTEX-12ZZX-2926-SM-5GCOQ 10.9
GTEX-ZUA1-3026-SM-59HJC 10.9
GTEX-13O3O-3126-SM-5KM3H 10.6
GTEX-144GL-3026-SM-5Q5CW 10.6
GTEX-R55F-1326-SM-5S2V4 10.6
GTEX-13O3Q-2926-SM-5KM45 10.5
GTEX-ZYFD-3026-SM-5E44C 10.5
GTEX-11PRG-2926-SM-5987A 10.4
GTEX-13FXS-3126-SM-5J2NN 10.4
GTEX-13X6J-3026-SM-5Q5CU 10.3
GTEX-131YS-3126-SM-5KLYT 10.2
GTEX-T5JC-2426-SM-3NMDB 10.0
GTEX-13PL6-3126-SM-5LUAR 9.9
GTEX-13SLX-3126-SM-5S2Q5 9.9
GTEX-12126-1026-SM-5P9JJ 9.4
GTEX-12WSH-3026-SM-5CVNI 9.4
GTEX-TSE9-3026-SM-3DB76 9.4
GTEX-RNOR-2326-SM-2TF4I 9.3
GTEX-145MH-3026-SM-5Q5DZ 9.1
GTEX-11ZUS-2926-SM-5FQSL 8.8
GTEX-WVLH-3026-SM-3MJG9 8.0
GTEX-11O72-2926-SM-5BC4V 7.9
GTEX-WWYW-3126-SM-3NB39 7.0
GTEX-11OF3-2926-SM-5HL78 5.8
GTEX-Z93S-2926-SM-57WB9 5.7
GTEX-PVOW-2526-SM-2XCF7 5.3
GTEX-T2IS-3026-SM-32QPM 5.3
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 14.9
Samples: 108

Max RPKM: 41
Min RPKM: 3.9
Std RPKM: 7.2
Median RPKM: 13.5
GTEX-XMD1-0011-R10A-SM-4AT4A 41.0
GTEX-13OVJ-0011-R10b-SM-5L3HT 38.9
GTEX-12WSA-0011-R10b-SM-5P9ET 38.8
GTEX-11ZUS-0011-R10b-SM-5BC79 29.9
GTEX-ZE7O-0011-R10a-SM-57WAZ 29.6
GTEX-1445S-0011-R10a-SM-5PNWB 28.3
GTEX-13JVG-0011-R10b-SM-5KM2P 27.2
GTEX-13FLW-0011-R10b-SM-5LZZF 26.9
GTEX-12WSD-0011-R10b-SM-5GU79 26.7
GTEX-11GSP-0011-R10a-SM-5NQ7J 25.0
GTEX-RVPU-0011-R10A-SM-2XCAH 24.5
GTEX-ZDXO-0011-R10a-SM-4WWD8 24.1
GTEX-13FLV-0011-R10b-SM-5LZZ2 23.4
GTEX-13SLW-0011-R10a-SM-5S2UI 23.1
GTEX-13OW8-0011-R10a-SM-5L3H6 22.0
GTEX-XLM4-0011-R10A-SM-4AT5P 21.6
GTEX-13CZV-0011-R10b-SM-5LZYD 21.5
GTEX-13N2G-0011-R10a-SM-5MR34 21.5
GTEX-ZAB4-0011-R10a-SM-4SOKH 21.5
GTEX-13JUV-0011-R10b-SM-5LZXR 20.8
GTEX-13NYS-0011-R10a-SM-5MR4S 20.2
GTEX-13X6K-0011-R10a-SM-5P9JR 20.1
GTEX-13FHO-0011-R10b-SM-5J2MM 20.0
GTEX-11H98-0011-R10b-SM-5NQ98 19.4
GTEX-P44H-0011-R10A-SM-2XCEK 19.3
GTEX-NL4W-0011-R10A-SM-2I3DY 18.8
GTEX-NPJ8-0011-R10A-SM-2YUMO 18.6
GTEX-13QJC-0011-R10a-SM-5SI63 17.8
GTEX-14BIL-0011-R10a-SM-5SI75 17.8
GTEX-NPJ7-0011-R10A-SM-2I3E5 17.8
GTEX-N7MT-0011-R10A-SM-2I3E1 17.5
GTEX-11WQC-0011-R10a-SM-57WCT 17.4
GTEX-ZV68-0011-R10a-SM-51MT7 17.2
GTEX-13OVL-0011-R10a-SM-5L3GS 16.5
GTEX-14753-0011-R10b-SM-5S2WE 16.5
GTEX-132Q8-0011-R10b-SM-5DUWZ 16.4
GTEX-QVUS-0011-R10A-SM-3GIK3 16.4
GTEX-12ZZY-0011-R10b-SM-5HL7W 16.0
GTEX-13X6I-0011-R10a-SM-5PNWI 15.4
GTEX-QVJO-0011-R10A-SM-2S1QJ 15.4
GTEX-13N1W-0011-R10b-SM-5MR4H 15.3
GTEX-S7SE-0011-R10A-SM-2XCDF 15.3
GTEX-1477Z-0011-R10b-SM-5S2RF 15.2
GTEX-139TS-0011-R10a-SM-5K7TU 14.8
GTEX-145LU-0011-R10a-SM-5PNWJ 14.8
GTEX-147F4-0011-R10b-SM-5S2WC 14.4
GTEX-TSE9-0011-R10A-SM-3DB7O 14.4
GTEX-ZVZQ-0011-R10b-SM-51MRT 14.4
GTEX-YFC4-0011-R10a-SM-4SOK5 14.3
GTEX-13OW6-0011-R10a-SM-5L3HE 14.2
GTEX-QDT8-0011-R10A-SM-32PKG 14.0
GTEX-13S7M-0011-R10b-SM-5PNZB 13.9
GTEX-WWYW-0011-R10A-SM-3NB35 13.8
GTEX-13G51-0011-R10b-SM-5LZYF 13.7
GTEX-131XW-0011-R10a-SM-5DUVA 13.3
GTEX-QMR6-0011-R10A-SM-32PKO 13.2
GTEX-13O3O-0011-R10a-SM-5LUA9 13.1
GTEX-11WQK-0011-R10a-SM-5BC6R 13.0
GTEX-X4XX-0011-R10B-SM-46MWO 13.0
GTEX-13FTZ-0011-R10b-SM-5KLZS 12.8
GTEX-X4EP-0011-R10B-SM-4QASJ 12.6
GTEX-12WSM-0011-R10a-SM-5DUWV 12.1
GTEX-13FXS-0011-R10a-SM-5J2MA 12.0
GTEX-13RTJ-0011-R10b-SM-5O9CW 11.8
GTEX-OXRO-0011-R10A-SM-2I5EH 11.6
GTEX-T5JC-0011-R10A-SM-32PM2 11.5
GTEX-12ZZW-0011-R10b-SM-5HL9X 11.3
GTEX-147GR-0011-R10b-SM-5S2UM 11.3
GTEX-131YS-0011-R10b-SM-5EQ5N 11.1
GTEX-ZUA1-0011-R10a-SM-51MT6 11.1
GTEX-OXRN-0011-R10A-SM-2I5GC 11.0
GTEX-X261-0011-R10B-SM-4E3JT 11.0
GTEX-X585-0011-R10A-SM-46MUY 10.6
GTEX-13QIC-0011-R10a-SM-5O9C7 10.4
GTEX-13OW7-0011-R10a-SM-5L3H3 10.3
GTEX-ZF28-0011-R10a-SM-4WWEH 10.3
GTEX-12WSF-0011-R10a-SM-5LZVH 10.2
GTEX-WVLH-0011-R10A-SM-3MJFM 10.2
GTEX-131XH-0011-R10a-SM-5EGLJ 10.1
GTEX-Q2AG-0011-R10A-SM-2HMLA 9.9
GTEX-14ASI-0011-R10b-SM-5S2VZ 9.8
GTEX-12WSH-0011-R10a-SM-5LZUS 9.7
GTEX-ZVT3-0011-R10b-SM-57WB6 9.6
GTEX-13NYB-0011-R10a-SM-5KM43 9.4
GTEX-145LS-0011-R10a-SM-5PNUQ 9.4
GTEX-13IVO-0011-R10a-SM-5LZY3 9.2
GTEX-YJ89-0011-R10a-SM-4SOK9 9.2
GTEX-13NZA-0011-R10b-SM-5KM54 9.1
GTEX-145MG-0011-R10a-SM-5PNWG 9.0
GTEX-ZXG5-0011-R10a-SM-57WDD 8.8
GTEX-13O3Q-0011-R10b-SM-5KM39 8.7
GTEX-145MH-0011-R10b-SM-5PNUK 8.5
GTEX-13SLX-0011-R10a-SM-5P9HV 8.3
GTEX-T6MN-0011-R10A-SM-32QP7 8.1
GTEX-12WSC-0011-R10a-SM-5GU57 7.8
GTEX-Y8DK-0011-R10A-SM-4SOK1 7.7
GTEX-WZTO-0011-R10B-SM-4E3KB 7.6
GTEX-12ZZZ-0011-R10a-SM-5P9HC 7.4
GTEX-N7MS-0011-R10A-SM-2HMJK 7.3
GTEX-Z93S-0011-R10a-SM-4RGNM 7.0
GTEX-14BIN-0011-R10a-SM-5S2UA 6.8
GTEX-13X6J-0011-R10b-SM-5PNWA 6.6
GTEX-12ZZX-0011-R10b-SM-5DUWK 6.5
GTEX-12126-0011-R10b-SM-5BC6T 6.1
GTEX-NL3H-0011-R10A-SM-2I3E9 5.7
GTEX-1313W-0011-R10b-SM-5DUXA 5.1
GTEX-WL46-0011-R10A-SM-3MJFQ 5.0
GTEX-12WSE-0011-R10b-SM-5P9JV 3.9
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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