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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:1052.1TPM
GTEx:184.6RPKM
FANTOM5:548.7Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA063339

 

Glandular cells

High  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

1052.1

overview Male, age 65
Sample 1
TPM: 1253.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 936.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 992.9
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 1025.8

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

184.6

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 184.6
Samples: 88

Max RPKM: 363.1
Min RPKM: 81.3
Std RPKM: 59.9
Median RPKM: 168.5
GTEX-WRHK-1026-SM-4MVOD 363.1
GTEX-Y5LM-1626-SM-4VDTB 314.0
GTEX-148VJ-2226-SM-5NQ9M 309.5
GTEX-X15G-1426-SM-4PQZK 302.5
GTEX-VUSG-1726-SM-4KKZL 300.1
GTEX-11VI4-1626-SM-5EQKO 295.5
GTEX-WH7G-1626-SM-4LVMY 291.7
GTEX-1399U-2126-SM-5IFEZ 289.1
GTEX-13O61-1326-SM-5KM31 284.4
GTEX-WFJO-0926-SM-4LVM2 273.7
GTEX-11NSD-1726-SM-5N9C3 266.8
GTEX-11P82-0826-SM-5P9GU 260.8
GTEX-13FH7-1226-SM-5IJFK 252.4
GTEX-ZLFU-1526-SM-4WWBT 251.6
GTEX-11XUK-1426-SM-5EQMG 246.2
GTEX-UPK5-2026-SM-4JBIM 246.1
GTEX-Z9EW-0926-SM-5CVMM 239.4
GTEX-ZEX8-1826-SM-57WBH 235.4
GTEX-13QBU-1926-SM-5IJEW 233.5
GTEX-ZVP2-1726-SM-5GU5P 227.8
GTEX-ZC5H-2326-SM-4WAYT 227.1
GTEX-131XG-1726-SM-5LZUR 219.2
GTEX-ZTPG-2626-SM-57WFX 218.4
GTEX-139T6-1026-SM-5IJGC 217.6
GTEX-14E6E-1626-SM-5RQI7 217.1
GTEX-ZP4G-1626-SM-57WGD 215.6
GTEX-145ME-0926-SM-5O9AR 215.0
GTEX-139YR-2226-SM-5IFFW 214.1
GTEX-13RTK-0826-SM-5Q5C6 213.7
GTEX-XGQ4-1326-SM-4GIDU 200.5
GTEX-VJYA-0926-SM-4KL1N 198.4
GTEX-12BJ1-1926-SM-5HL9Z 196.2
GTEX-1192X-2526-SM-59868 195.8
GTEX-ZA64-1226-SM-5HL7B 193.1
GTEX-ZYWO-1526-SM-5SIAL 187.7
GTEX-WFG8-1626-SM-4LVMB 186.5
GTEX-Y3IK-1726-SM-4YCCR 186.4
GTEX-13113-1226-SM-5EGHT 185.2
GTEX-13CF3-1226-SM-5LZXN 184.7
GTEX-11I78-1126-SM-5A5K5 176.5
GTEX-11DXZ-1326-SM-5H11X 172.0
GTEX-11DXX-1626-SM-5H11H 171.4
GTEX-1399R-2026-SM-5K7WN 170.6
GTEX-ZXES-1526-SM-5NQ95 168.9
GTEX-ZQG8-2526-SM-57WEQ 168.1
GTEX-WEY5-1526-SM-4LMJF 166.8
GTEX-X5EB-1626-SM-4E3IV 165.6
GTEX-1399S-2026-SM-5KM4B 162.2
GTEX-13111-1426-SM-5DUW3 161.7
GTEX-XAJ8-0526-SM-47JYK 159.7
GTEX-133LE-1426-SM-5IFH1 158.4
GTEX-ZZ64-0526-SM-5GZXM 157.9
GTEX-11P7K-1626-SM-5GU63 157.7
GTEX-11EQ9-1326-SM-5985X 157.3
GTEX-131XF-1326-SM-5GCMQ 157.0
GTEX-WFG7-1726-SM-4LVME 155.8
GTEX-12WSK-1526-SM-5CVNO 155.6
GTEX-ZYFG-2026-SM-5E43Y 155.3
GTEX-ZPIC-2326-SM-57WDW 154.3
GTEX-145LT-1026-SM-5LU9O 152.3
GTEX-XBED-1426-SM-4AT4G 152.2
GTEX-XMK1-1826-SM-4B66F 151.4
GTEX-XUZC-1426-SM-4BRV3 148.5
GTEX-117YX-0326-SM-5GICL 145.1
GTEX-ZVT2-2126-SM-5NQ93 143.6
GTEX-13O21-1026-SM-5IJDU 141.9
GTEX-Y114-1426-SM-4TT6W 140.1
GTEX-WQUQ-2426-SM-4MVNW 135.7
GTEX-ZTX8-0526-SM-59HLD 134.8
GTEX-ZF2S-1726-SM-57WFT 133.8
GTEX-YB5E-1526-SM-5IFIE 132.0
GTEX-14DAR-1426-SM-5RQIR 131.9
GTEX-XXEK-1026-SM-4BRUW 130.6
GTEX-YEC4-1726-SM-4W21E 130.5
GTEX-ZQUD-0926-SM-57WE3 127.9
GTEX-13OVI-1926-SM-5IJCG 124.8
GTEX-111CU-1326-SM-5NQ8L 124.5
GTEX-ZLV1-1126-SM-4WWBW 121.8
GTEX-13PL7-2626-SM-5IFH4 121.7
GTEX-13D11-0726-SM-5LZZB 120.0
GTEX-13FTW-2026-SM-5IJE2 118.0
GTEX-ZVZP-1826-SM-5GZXB 107.4
GTEX-YF7O-1826-SM-5IFIU 102.1
GTEX-Y9LG-1626-SM-5IFHM 101.9
GTEX-1122O-1326-SM-5H11F 99.2
GTEX-ZPCL-1726-SM-57WEO 97.9
GTEX-ZTSS-0926-SM-59865 86.7
GTEX-111YS-1426-SM-5GID8 81.3
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

548.7

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 548.7
FF:10024-101D6 15,40,85 years, mixed 548.7

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