We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
RAB3C
  • premium

    TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:8.6RPKM
FANTOM5:168.3Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA003160

 

Glial cells

Not detected  

Neuronal cells

Not detected  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

8.6

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 8.6
Samples: 117

Max RPKM: 36.7
Min RPKM: 0.5
Std RPKM: 5.7
Median RPKM: 8.1
GTEX-T2IS-0011-R5A-SM-32QP4 36.7
GTEX-PVOW-0011-R5A-SM-32PL7 24.9
GTEX-131YS-0011-R5b-SM-5K7YB 21.6
GTEX-X585-0011-R5A-SM-46MVI 18.5
GTEX-T6MN-0011-R5A-SM-32QPD 17.7
GTEX-WZTO-0011-R5B-SM-3NMC5 17.7
GTEX-UTHO-0011-R5A-SM-3GIJD 17.0
GTEX-S7SE-0011-R5A-SM-2XCDA 16.9
GTEX-QVJO-0011-R5A-SM-2S1QM 16.5
GTEX-13X6J-0011-R5b-SM-5PNWT 16.0
GTEX-145MH-0011-R5a-SM-5P9JT 15.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 15.6
GTEX-13G51-0011-R5a-SM-5L3EB 15.4
GTEX-WL46-0011-R5A-SM-3LK6V 15.3
GTEX-Z93S-0011-R5b-SM-4RGNI 14.6
GTEX-12WSC-0011-R5b-SM-5CVNS 14.4
GTEX-145LS-0011-R5a-SM-5SI65 14.1
GTEX-1313W-0011-R5b-SM-5L3EP 13.9
GTEX-WVLH-0011-R5A-SM-3MJFW 13.8
GTEX-WWYW-0011-R5A-SM-3NB3E 13.7
GTEX-11OF3-0011-R5a-SM-57WB4 13.6
GTEX-14BIM-0011-R5b-SM-5S2RM 13.5
GTEX-1399T-0011-R5b-SM-5IJDK 13.2
GTEX-139TT-0011-R5b-SM-5K7W8 13.0
GTEX-N7MS-0011-R5a-SM-2HMK8 12.7
GTEX-WHSE-0011-R5A-SM-3P5ZO 12.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 12.4
GTEX-13FXS-0011-R5b-SM-5LZYE 12.3
GTEX-14ABY-0011-R5b-SM-5SI7B 12.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 12.2
GTEX-11NV4-0011-R5a-SM-5NQ88 12.1
GTEX-13O3O-0011-R5b-SM-5KM44 12.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 12.0
GTEX-R55E-0011-R5A-SM-2TC5N 11.7
GTEX-12WSF-0011-R5a-SM-5HL8K 11.5
GTEX-13VXU-0011-R5a-SM-5O9D7 11.5
GTEX-13SLX-0011-R5a-SM-5O9BV 11.4
GTEX-P44H-0011-R5A-SM-2XCEX 11.4
GTEX-13OVL-0011-R5b-SM-5L3FU 11.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 10.5
GTEX-ZUA1-0011-R5b-SM-51MTG 10.3
GTEX-12WSB-0011-R5b-SM-5GU67 10.2
GTEX-N7MT-0011-R5a-SM-2I3G6 10.2
GTEX-T5JC-0011-R5A-SM-32PLK 10.0
GTEX-13OW6-0011-R5a-SM-5O9BK 9.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 9.6
GTEX-13FLW-0011-R5a-SM-5LZX6 9.5
GTEX-13NYB-0011-R5a-SM-5MR45 9.4
GTEX-13S7M-0011-R5b-SM-5P9HS 9.3
GTEX-RU72-0011-R5A-SM-2TF6U 9.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 8.8
GTEX-11GSP-0011-R5a-SM-57WBE 8.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 8.7
GTEX-11H98-0011-R5b-SM-57WCF 8.6
GTEX-13X6I-0011-R5a-SM-5PNWW 8.6
GTEX-14BIN-0011-R5b-SM-5SI78 8.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 8.2
GTEX-TSE9-0011-R5A-SM-3DB7J 8.2
GTEX-12ZZX-0011-R5a-SM-5HL89 8.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 8.0
GTEX-13X6K-0011-R5b-SM-5PNUE 7.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 7.7
GTEX-13OW7-0011-R5b-SM-5O9DM 7.6
GTEX-132Q8-0011-R5a-SM-5IJDM 7.5
GTEX-13JUV-0011-R5a-SM-5LZY5 7.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 7.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 7.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 7.2
GTEX-QMR6-0011-R5A-SM-32PKT 7.2
GTEX-13OVH-0011-R5b-SM-5KM4L 7.0
GTEX-RVPU-0011-R5A-SM-2XCAD 6.6
GTEX-NL3H-0011-R5a-SM-2I3GB 6.5
GTEX-13FLV-0011-R5a-SM-5LZWT 6.2
GTEX-YFC4-0011-R5a-SM-4RGLR 6.1
GTEX-NL4W-0011-R5a-SM-2I3GD 5.9
GTEX-12WSD-0011-R5b-SM-5CVNG 5.6
GTEX-13CZV-0011-R5a-SM-5K7XA 5.6
GTEX-RVPV-0011-R5A-SM-2TF69 5.6
GTEX-ZE7O-0011-R5a-SM-57WBO 5.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 5.0
GTEX-13NYS-0011-R5a-SM-5MR4D 4.9
GTEX-13OW5-0011-R5b-SM-5L3FR 4.9
GTEX-XOTO-0011-R5A-SM-4B657 4.6
GTEX-ZXG5-0011-R5b-SM-57WBN 4.6
GTEX-12WSH-0011-R5b-SM-5P9F3 4.5
GTEX-12WSA-0011-R5b-SM-5GU5I 4.4
GTEX-NPJ7-0011-R5a-SM-33HBK 4.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 4.2
GTEX-OHPN-0011-R5A-SM-2I5FF 4.0
GTEX-XMD1-0011-R5A-SM-4AT47 4.0
GTEX-13112-0011-R5b-SM-5DUV8 3.6
GTEX-OXRN-0011-R5A-SM-2I5EF 3.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 3.0
GTEX-YJ89-0011-R5a-SM-4V6GM 3.0
GTEX-ZVT3-0011-R5a-SM-51MSI 2.9
GTEX-11WQC-0011-R5a-SM-5BC74 2.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 2.8
GTEX-13CIG-0011-R5b-SM-5L3F2 2.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 2.7
GTEX-144GO-0011-R5a-SM-5PNUR 2.5
GTEX-13JVG-0011-R5a-SM-5MR4O 2.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 2.2
GTEX-X4XX-0011-R5A-SM-46MWN 2.1
GTEX-144GL-0011-R5b-SM-5PNUJ 1.9
GTEX-139TS-0011-R5b-SM-5J2MZ 1.8
GTEX-X261-0011-R5A-SM-3NMB4 1.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 1.6
GTEX-13FHP-0011-R5b-SM-5LZY2 1.5
GTEX-ZV68-0011-R5a-SM-4YCDW 1.3
GTEX-13CF2-0011-R5a-SM-5LZWS 1.0
GTEX-13NZA-0011-R5b-SM-5KM4K 0.8
GTEX-1445S-0011-R5a-SM-5PNUS 0.8
GTEX-1477Z-0011-R5b-SM-5PNUO 0.8
GTEX-S7PM-0011-R5A-SM-3NM8G 0.8
GTEX-11UD1-0011-R5b-SM-5P9FP 0.7
GTEX-139T8-0011-R5b-SM-5J1MO 0.6
GTEX-145MG-0011-R5b-SM-5S2VU 0.5
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

168.3

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 168.3
FF:10164-103B2 76 years, female 210.6
FF:10379-105H1 89 years, female 126.0

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.