We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
MCU
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA ESOPHAGUS

GENE/PROTEIN

Antibody validation


Dictionary

Esophagus

Tissue proteome

Esophagus

ESOPHAGUS - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:15.8TPM
GTEx:7.9RPKM
FANTOM5:29.9Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:High
 

Antibody staining

Antibody HPA016480

 

Squamous epithelial cells

High  
 
 
 

ESOPHAGUS - HPA RNA-seq

Average TPM

15.8

overview Female, age 70
Sample 1
TPM: 16.2
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38
Sample 2
TPM: 18.0
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76
Sample 3
TPM: 13.1
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

7.9

GTEx sample id

RPKM

 

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 7.9
Samples: 286

Max RPKM: 18.1
Min RPKM: 3
Std RPKM: 2.5
Median RPKM: 7.6
GTEX-R55G-1026-SM-48FDI 18.1
GTEX-14BMU-0926-SM-5S2QB 15.4
GTEX-ZYWO-1026-SM-5E45U 14.9
GTEX-ZYT6-1126-SM-5GZYR 14.6
GTEX-11EM3-0826-SM-5N9CC 14.0
GTEX-OXRN-1726-SM-3NM9B 14.0
GTEX-ZC5H-1326-SM-5HL7E 13.8
GTEX-VUSG-1226-SM-4KKZF 13.6
GTEX-U4B1-0826-SM-4DXTW 13.5
GTEX-111CU-0726-SM-5GZYD 13.4
GTEX-T6MO-0526-SM-4DM6R 13.3
GTEX-XV7Q-1126-SM-4BRVS 13.2
GTEX-146FH-1726-SM-5QGQ2 13.0
GTEX-OXRP-0926-SM-48TC1 13.0
GTEX-QV44-1126-SM-4R1KO 12.7
GTEX-XXEK-0326-SM-4BRVV 12.6
GTEX-11DXX-1126-SM-5GZZK 12.3
GTEX-131XE-1426-SM-5HL7V 12.3
GTEX-1211K-0926-SM-5FQTL 12.1
GTEX-O5YV-1026-SM-3LK72 12.1
GTEX-Q2AH-0826-SM-48TZN 12.1
GTEX-XK95-1026-SM-4GIDV 12.1
GTEX-UPK5-1226-SM-4IHL8 12.0
GTEX-ZTPG-1626-SM-5DUX2 11.7
GTEX-11LCK-1726-SM-5S2OQ 11.6
GTEX-REY6-1326-SM-48FDO 11.6
GTEX-Y5LM-1026-SM-4VDSQ 11.5
GTEX-YF7O-0926-SM-5IFIF 11.5
GTEX-14H4A-1626-SM-5SI69 11.4
GTEX-RU1J-0326-SM-46MUM 11.3
GTEX-X4XY-1726-SM-46MVO 11.3
GTEX-13OVI-2626-SM-5KM4T 11.2
GTEX-ZG7Y-1126-SM-4WWEZ 11.2
GTEX-12BJ1-1626-SM-5HL8Y 11.1
GTEX-144GM-1426-SM-5LU31 11.1
GTEX-12ZZY-1426-SM-5N9EI 10.9
GTEX-RN64-1026-SM-48FDX 10.9
GTEX-XUJ4-1026-SM-4BOPB 10.9
GTEX-111YS-0926-SM-5EGGI 10.8
GTEX-11TT1-0526-SM-5P9JO 10.8
GTEX-13X6K-2126-SM-5O9D4 10.8
GTEX-139YR-1726-SM-5IFFK 10.7
GTEX-P4QT-0626-SM-3NMCP 10.6
GTEX-133LE-0626-SM-5IFFJ 10.5
GTEX-WOFM-0626-SM-4OOS3 10.5
GTEX-13X6H-1326-SM-5LU42 10.4
GTEX-QEG5-1426-SM-447AS 10.4
GTEX-13FH7-0526-SM-5IJF8 10.3
GTEX-14DAQ-1426-SM-5RQJD 10.3
GTEX-11P82-0526-SM-5986P 10.2
GTEX-13FTX-0526-SM-5IFGS 10.2
GTEX-13RTK-0526-SM-5S2QF 10.2
GTEX-RUSQ-0826-SM-47JWW 10.2
GTEX-SNMC-0526-SM-4DM69 10.1
GTEX-U3ZM-0526-SM-4DXTB 10.1
GTEX-XGQ4-1526-SM-4AT6H 10.1
GTEX-131XF-0826-SM-5GICG 10.0
GTEX-131XG-1026-SM-5GCMX 10.0
GTEX-WVLH-1426-SM-4MVNX 10.0
GTEX-ZYFG-1126-SM-5GICY 10.0
GTEX-1399Q-1126-SM-5P9JA 9.9
GTEX-QLQ7-0926-SM-447BC 9.9
GTEX-117YW-1926-SM-5H121 9.8
GTEX-13O1R-1326-SM-5IJF5 9.8
GTEX-Y5V5-1626-SM-4VDSG 9.8
GTEX-11ONC-1526-SM-5GU6S 9.7
GTEX-131YS-1426-SM-5IJF7 9.7
GTEX-1399R-0826-SM-5IJEL 9.7
GTEX-ZF2S-1226-SM-4WWAX 9.7
GTEX-ZPCL-1426-SM-57WEC 9.7
GTEX-12C56-1226-SM-5FQSU 9.6
GTEX-14AS3-0626-SM-5QGQD 9.6
GTEX-WFG8-1226-SM-4V6EI 9.6
GTEX-13CF3-1626-SM-5IFG9 9.5
GTEX-13QJ3-1726-SM-5RQK9 9.5
GTEX-RM2N-0726-SM-48FD5 9.5
GTEX-XBEW-1326-SM-4AT63 9.5
GTEX-ZUA1-1226-SM-5NQ6O 9.5
GTEX-1122O-1726-SM-5GICM 9.4
GTEX-R55E-1326-SM-48FCR 9.4
GTEX-X4LF-0626-SM-4QASB 9.4
GTEX-U8XE-1726-SM-4E3IF 9.2
GTEX-ZVT2-1326-SM-5E45H 9.2
GTEX-12WSL-1526-SM-5GCP8 9.1
GTEX-1399S-1326-SM-5P9GH 9.1
GTEX-13PVR-1826-SM-5Q5CC 9.1
GTEX-13OW8-2326-SM-5L3I9 9.0
GTEX-S3XE-0926-SM-4AD4S 9.0
GTEX-TML8-1526-SM-4DXUX 9.0
GTEX-144FL-2726-SM-5O98Z 8.9
GTEX-TMMY-1126-SM-4DXSX 8.9
GTEX-1497J-2726-SM-5SI9W 8.8
GTEX-XOTO-2126-SM-4B64U 8.8
GTEX-X15G-0826-SM-4PQZD 8.7
GTEX-Y8E4-1726-SM-5LU9G 8.7
GTEX-PWN1-0626-SM-48TDT 8.5
GTEX-R53T-1126-SM-48FD4 8.5
GTEX-Y114-0926-SM-4TT7J 8.5
GTEX-ZE9C-1126-SM-4WWBD 8.5
GTEX-ZF3C-1626-SM-4WWB4 8.5
GTEX-117YX-1626-SM-5GZZG 8.4
GTEX-11EQ9-0726-SM-5A5K2 8.4
GTEX-ZT9X-0526-SM-5GCOP 8.4
GTEX-132AR-2226-SM-5J2NT 8.3
GTEX-14E6E-0726-SM-5S2R3 8.2
GTEX-OOBK-0625-SM-3LK5P 8.2
GTEX-P4PQ-0626-SM-3NMCU 8.2
GTEX-QDVN-1026-SM-48TZA 8.2
GTEX-T8EM-0526-SM-4DM64 8.2
GTEX-ZA64-0626-SM-5HL9O 8.2
GTEX-ZXES-1126-SM-5GZXN 8.2
GTEX-UPIC-1026-SM-4IHLT 8.1
GTEX-VJYA-0726-SM-4KL1T 8.1
GTEX-XQ8I-1526-SM-4BOOH 8.1
GTEX-11DXZ-1226-SM-5H11L 8.0
GTEX-11EMC-2226-SM-5A5JW 8.0
GTEX-11NSD-1126-SM-5N9BQ 8.0
GTEX-13O3Q-0826-SM-5IFGF 8.0
GTEX-N7MT-0326-SM-48TDP 8.0
GTEX-PSDG-1326-SM-48TD2 8.0
GTEX-PWCY-0726-SM-48TCS 8.0
GTEX-XLM4-2326-SM-4TT2D 8.0
GTEX-XMD2-1326-SM-4YCET 8.0
GTEX-13FHO-1726-SM-5IFGM 7.9
GTEX-T5JW-1326-SM-4DM5G 7.9
GTEX-X585-1226-SM-46MW7 7.9
GTEX-XYKS-1526-SM-4BRUP 7.9
GTEX-NFK9-1126-SM-3LK78 7.8
GTEX-R45C-1226-SM-48FEE 7.8
GTEX-T2IS-0826-SM-4DM6L 7.8
GTEX-WRHK-0526-SM-4MVOF 7.8
GTEX-132Q8-1826-SM-5EGIY 7.7
GTEX-145LS-1826-SM-5LUAZ 7.7
GTEX-14A6H-1326-SM-5NQBC 7.7
GTEX-PLZ6-0526-SM-3P61C 7.7
GTEX-S33H-0826-SM-4AD5Y 7.7
GTEX-WEY5-0926-SM-4LMI4 7.7
GTEX-145MN-1026-SM-5NQ9G 7.6
GTEX-14C38-2126-SM-5RQJO 7.6
GTEX-OIZG-1026-SM-3LK5X 7.6
GTEX-P4PP-0626-SM-3NM9X 7.6
GTEX-S4P3-0426-SM-4AD56 7.6
GTEX-S95S-0426-SM-4B64I 7.6
GTEX-Y3I4-1226-SM-4TT8N 7.6
GTEX-ZVP2-1326-SM-57WCE 7.6
GTEX-11NUK-1326-SM-5P9GN 7.5
GTEX-Q2AI-0626-SM-48TZU 7.5
GTEX-QVUS-0626-SM-447CC 7.5
GTEX-S341-0526-SM-4AD5U 7.5
GTEX-WQUQ-1626-SM-4OOSH 7.5
GTEX-Y5V6-1026-SM-4VBS2 7.5
GTEX-ZT9W-1326-SM-51MTB 7.5
GTEX-12ZZX-1326-SM-5DUWI 7.4
GTEX-145MF-1426-SM-5O9B6 7.4
GTEX-14E1K-1226-SM-5S2PD 7.4
GTEX-QEG4-0726-SM-4R1JL 7.4
GTEX-ZAB4-1126-SM-5HL86 7.4
GTEX-ZAB5-0926-SM-5CVMV 7.4
GTEX-ZY6K-0626-SM-59HJL 7.4
GTEX-QESD-0826-SM-47J4G 7.3
GTEX-WFJO-0826-SM-4LVM5 7.3
GTEX-YFC4-1226-SM-5LU9R 7.3
GTEX-11P7K-1326-SM-5BC5G 7.2
GTEX-11VI4-0526-SM-5EQ48 7.2
GTEX-144GO-2726-SM-5O9A2 7.2
GTEX-OXRL-0626-SM-3NM9C 7.2
GTEX-S4Q7-0626-SM-4AD5M 7.2
GTEX-12WSA-1426-SM-5EGJU 7.1
GTEX-13FTW-1626-SM-5KM4N 7.1
GTEX-13G51-0926-SM-5IFFU 7.1
GTEX-NPJ8-1926-SM-3MJGB 7.1
GTEX-QDVJ-0726-SM-48U1W 7.1
GTEX-RU72-0726-SM-46MUW 7.1
GTEX-SE5C-1226-SM-4BRWV 7.1
GTEX-SNOS-0626-SM-4DM5F 7.1
GTEX-XMK1-1326-SM-4B65Q 7.1
GTEX-11TUW-1326-SM-5EQKV 7.0
GTEX-13NZB-1226-SM-5J2MW 7.0
GTEX-13W46-1926-SM-5J2MF 7.0
GTEX-11DXY-1426-SM-5N9CN 6.9
GTEX-11GSP-1826-SM-5N9DQ 6.9
GTEX-RVPV-0526-SM-47JYL 6.9
GTEX-TSE9-1226-SM-4DXTM 6.9
GTEX-Y3IK-1126-SM-51MSV 6.9
GTEX-YB5E-0926-SM-4WWDQ 6.9
GTEX-ZYY3-1526-SM-5SIA9 6.9
GTEX-R3RS-1326-SM-48FE7 6.8
GTEX-RNOR-1226-SM-48FDQ 6.8
GTEX-UJHI-0826-SM-4IHLM 6.8
GTEX-X4EO-1226-SM-4QARR 6.8
GTEX-Y9LG-0626-SM-4WWDH 6.8
GTEX-ZGAY-1126-SM-4WWBS 6.8
GTEX-13S86-0826-SM-5SI6J 6.7
GTEX-U3ZN-1726-SM-4DXUQ 6.7
GTEX-W5WG-1626-SM-4LMKG 6.7
GTEX-13O21-0626-SM-5IJDI 6.6
GTEX-144GN-0626-SM-5O9B2 6.6
GTEX-12696-1326-SM-5FQTJ 6.5
GTEX-132QS-1426-SM-5P9GE 6.5
GTEX-145ME-0526-SM-5QGQV 6.4
GTEX-145MO-1426-SM-5Q5BS 6.4
GTEX-Y111-1626-SM-57WCY 6.4
GTEX-ZVE2-1326-SM-5NQ94 6.4
GTEX-V1D1-1026-SM-4JBHE 6.3
GTEX-XBED-1026-SM-48TCB 6.3
GTEX-XQ3S-1126-SM-4BOPK 6.3
GTEX-ZTX8-0226-SM-5E44D 6.3
GTEX-13X6I-1026-SM-5LU4C 6.2
GTEX-147F3-0826-SM-5NQA7 6.2
GTEX-OIZH-0626-SM-3NB1L 6.2
GTEX-11DYG-1326-SM-5N9DO 6.1
GTEX-11XUK-0826-SM-5GU6P 6.1
GTEX-13FLV-1126-SM-5J2NO 6.1
GTEX-QCQG-0626-SM-48U21 6.1
GTEX-ZQUD-0426-SM-57WFR 6.1
GTEX-ZZPT-1426-SM-5N9C5 6.1
GTEX-V955-1126-SM-4JBH3 6.0
GTEX-13OVG-0626-SM-5IFEP 5.9
GTEX-PLZ4-1626-SM-3P618 5.9
GTEX-RWS6-0826-SM-47JXF 5.9
GTEX-WFON-0826-SM-4LVMI 5.9
GTEX-ZTSS-0626-SM-59867 5.9
GTEX-148VJ-1026-SM-5LU98 5.8
GTEX-OXRK-1326-SM-3NB1A 5.8
GTEX-P78B-1026-SM-3NMC4 5.8
GTEX-ZLV1-0526-SM-4WWD4 5.8
GTEX-14BIN-2726-SM-5RQIE 5.7
GTEX-R55D-1126-SM-48FEB 5.7
GTEX-11P81-0826-SM-5P9GR 5.6
GTEX-12ZZW-1726-SM-5DUVD 5.6
GTEX-13D11-1926-SM-5IFGB 5.6
GTEX-146FR-0426-SM-5SI97 5.6
GTEX-QEL4-1426-SM-447AC 5.6
GTEX-TKQ1-0326-SM-4DXSM 5.6
GTEX-ZYW4-1326-SM-5E45N 5.6
GTEX-13PVQ-1726-SM-5IFF3 5.5
GTEX-146FQ-1026-SM-5LU8I 5.5
GTEX-RTLS-1126-SM-46MUQ 5.5
GTEX-ZYVF-2226-SM-5GIDD 5.5
GTEX-ZZ64-0226-SM-5E44X 5.5
GTEX-139UW-1126-SM-5IJEJ 5.4
GTEX-11DZ1-2026-SM-5A5KG 5.3
GTEX-13111-0826-SM-5LZV3 5.3
GTEX-PVOW-1626-SM-48TC9 5.3
GTEX-1212Z-2126-SM-5FQTM 5.2
GTEX-QLQW-0526-SM-4R1KS 5.2
GTEX-S32W-0926-SM-4AD5X 5.2
GTEX-YJ89-1526-SM-5P9IR 5.2
GTEX-1399U-1026-SM-5J1OC 5.1
GTEX-139TU-1226-SM-5J2NL 5.1
GTEX-SUCS-0726-SM-4DM7J 5.1
GTEX-UJMC-0926-SM-4IHLK 5.1
GTEX-YECK-1626-SM-5IFHQ 5.1
GTEX-139T6-0626-SM-5IFF9 5.0
GTEX-13OVJ-1226-SM-5L3HA 5.0
GTEX-X3Y1-1326-SM-4PQZB 5.0
GTEX-WK11-1026-SM-4OOS8 4.8
GTEX-11I78-1526-SM-5A5K7 4.7
GTEX-145LV-1326-SM-5S2QI 4.7
GTEX-P4QS-0626-SM-3NMD1 4.7
GTEX-T5JC-1726-SM-4DM6U 4.7
GTEX-YEC3-2526-SM-4YCDN 4.7
GTEX-ZF29-1326-SM-4WWB6 4.7
GTEX-12WSD-1826-SM-5GCOA 4.5
GTEX-S7SF-0926-SM-4AD4M 4.5
GTEX-12KS4-0926-SM-5BC5S 4.4
GTEX-145LT-1126-SM-5LUA1 4.4
GTEX-PLZ5-0926-SM-3TW8L 4.4
GTEX-WH7G-0926-SM-4LVMJ 4.4
GTEX-ZPU1-1426-SM-4WWFU 4.4
GTEX-11ZTS-2626-SM-5EGIC 4.3
GTEX-13QBU-1026-SM-5LU3R 4.3
GTEX-X62O-2226-SM-46MW3 4.3
GTEX-Y8LW-0726-SM-5IFI1 4.3
GTEX-13U4I-1126-SM-5LU3S 4.2
GTEX-ZDYS-0826-SM-4WWCR 4.2
GTEX-Z9EW-0526-SM-5HL8S 4.0
GTEX-13W3W-1626-SM-5LU35 3.8
GTEX-OIZI-1426-SM-3NB1T 3.8
GTEX-11ZU8-1526-SM-5EGHX 3.7
GTEX-12WSK-1126-SM-5LZV8 3.7
GTEX-WFG7-1126-SM-4LMK3 3.6
GTEX-XUZC-0426-SM-4BOPE 3.5
GTEX-14ICL-0526-SM-5RQJ6 3.3
GTEX-R55C-0826-SM-48FCL 3.3
GTEX-U3ZH-1026-SM-4DXUZ 3.0
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

29.9

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 29.9
FF:10015-101C6 68,74,75 years, mixed 29.9

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.