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TISSUE ATLAS PRIMARY DATA CAUDATE
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:93.8RPKM
FANTOM5:335.3Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 
 
 

Antibody staining

Antibody HPA019472

 

Antibody CAB000075

 

Glial cells

Not detected  

Neuronal cells

Not detected  
      
      
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

93.8

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 93.8
Samples: 117

Max RPKM: 278.3
Min RPKM: 2.5
Std RPKM: 57.1
Median RPKM: 88.8
GTEX-RVPV-0011-R5A-SM-2TF69 278.3
GTEX-X585-0011-R5A-SM-46MVI 253.7
GTEX-13OW6-0011-R5a-SM-5O9BK 205.9
GTEX-13NYB-0011-R5a-SM-5MR45 203.9
GTEX-1399T-0011-R5b-SM-5IJDK 195.1
GTEX-TSE9-0011-R5A-SM-3DB7J 184.9
GTEX-12ZZX-0011-R5a-SM-5HL89 179.1
GTEX-13FXS-0011-R5b-SM-5LZYE 174.2
GTEX-12WSF-0011-R5a-SM-5HL8K 174.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 173.9
GTEX-13X6I-0011-R5a-SM-5PNWW 173.6
GTEX-145LS-0011-R5a-SM-5SI65 169.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 166.4
GTEX-WZTO-0011-R5B-SM-3NMC5 160.5
GTEX-13VXU-0011-R5a-SM-5O9D7 160.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 158.6
GTEX-12WSB-0011-R5b-SM-5GU67 155.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 154.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 151.9
GTEX-14BIM-0011-R5b-SM-5S2RM 149.4
GTEX-13FLW-0011-R5a-SM-5LZX6 149.3
GTEX-13X6K-0011-R5b-SM-5PNUE 148.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 148.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 147.1
GTEX-13S7M-0011-R5b-SM-5P9HS 142.5
GTEX-13O3O-0011-R5b-SM-5KM44 141.6
GTEX-12WSC-0011-R5b-SM-5CVNS 139.9
GTEX-N7MS-0011-R5a-SM-2HMK8 139.3
GTEX-QMR6-0011-R5A-SM-32PKT 138.9
GTEX-11H98-0011-R5b-SM-57WCF 135.6
GTEX-OHPN-0011-R5A-SM-2I5FF 134.2
GTEX-NL3H-0011-R5a-SM-2I3GB 134.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 132.1
GTEX-13FLV-0011-R5a-SM-5LZWT 130.7
GTEX-132Q8-0011-R5a-SM-5IJDM 130.4
GTEX-Z93S-0011-R5b-SM-4RGNI 130.3
GTEX-WWYW-0011-R5A-SM-3NB3E 128.7
GTEX-13OVH-0011-R5b-SM-5KM4L 126.8
GTEX-11NV4-0011-R5a-SM-5NQ88 124.1
GTEX-RVPU-0011-R5A-SM-2XCAD 122.3
GTEX-13G51-0011-R5a-SM-5L3EB 118.2
GTEX-131YS-0011-R5b-SM-5K7YB 117.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 116.7
GTEX-PVOW-0011-R5A-SM-32PL7 115.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 112.7
GTEX-139TT-0011-R5b-SM-5K7W8 112.2
GTEX-13SLX-0011-R5a-SM-5O9BV 111.5
GTEX-13OVL-0011-R5b-SM-5L3FU 107.4
GTEX-13NYS-0011-R5a-SM-5MR4D 107.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 107.2
GTEX-14BIN-0011-R5b-SM-5SI78 104.0
GTEX-13CZV-0011-R5a-SM-5K7XA 102.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 100.6
GTEX-NPJ7-0011-R5a-SM-33HBK 95.0
GTEX-YFC4-0011-R5a-SM-4RGLR 91.4
GTEX-12WSA-0011-R5b-SM-5GU5I 90.9
GTEX-13OW7-0011-R5b-SM-5O9DM 90.8
GTEX-WVLH-0011-R5A-SM-3MJFW 90.6
GTEX-XMD1-0011-R5A-SM-4AT47 88.8
GTEX-NL4W-0011-R5a-SM-2I3GD 85.0
GTEX-P44H-0011-R5A-SM-2XCEX 83.5
GTEX-ZXG5-0011-R5b-SM-57WBN 82.1
GTEX-14ABY-0011-R5b-SM-5SI7B 81.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 80.7
GTEX-12WSD-0011-R5b-SM-5CVNG 80.2
GTEX-11GSP-0011-R5a-SM-57WBE 79.8
GTEX-13OW5-0011-R5b-SM-5L3FR 78.1
GTEX-N7MT-0011-R5a-SM-2I3G6 77.1
GTEX-T2IS-0011-R5A-SM-32QP4 73.9
GTEX-1313W-0011-R5b-SM-5L3EP 72.1
GTEX-WL46-0011-R5A-SM-3LK6V 71.2
GTEX-ZE7O-0011-R5a-SM-57WBO 66.9
GTEX-ZUA1-0011-R5b-SM-51MTG 66.7
GTEX-13JVG-0011-R5a-SM-5MR4O 66.3
GTEX-13X6J-0011-R5b-SM-5PNWT 59.9
GTEX-QVJO-0011-R5A-SM-2S1QM 57.4
GTEX-S7SE-0011-R5A-SM-2XCDA 56.9
GTEX-XOTO-0011-R5A-SM-4B657 56.7
GTEX-145MH-0011-R5a-SM-5P9JT 56.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 55.8
GTEX-WHSE-0011-R5A-SM-3P5ZO 55.8
GTEX-UTHO-0011-R5A-SM-3GIJD 55.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 54.0
GTEX-YJ89-0011-R5a-SM-4V6GM 53.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 51.0
GTEX-13CF2-0011-R5a-SM-5LZWS 50.0
GTEX-13JUV-0011-R5a-SM-5LZY5 49.9
GTEX-T6MN-0011-R5A-SM-32QPD 49.1
GTEX-11OF3-0011-R5a-SM-57WB4 48.7
GTEX-12WSH-0011-R5b-SM-5P9F3 42.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 42.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 41.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 38.4
GTEX-139TS-0011-R5b-SM-5J2MZ 35.8
GTEX-R55E-0011-R5A-SM-2TC5N 34.8
GTEX-OXRN-0011-R5A-SM-2I5EF 34.7
GTEX-13112-0011-R5b-SM-5DUV8 33.4
GTEX-144GL-0011-R5b-SM-5PNUJ 32.4
GTEX-ZVT3-0011-R5a-SM-51MSI 31.7
GTEX-X4XX-0011-R5A-SM-46MWN 31.6
GTEX-RU72-0011-R5A-SM-2TF6U 31.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 30.3
GTEX-11WQC-0011-R5a-SM-5BC74 28.3
GTEX-X261-0011-R5A-SM-3NMB4 27.2
GTEX-144GO-0011-R5a-SM-5PNUR 26.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 25.3
GTEX-T5JC-0011-R5A-SM-32PLK 21.7
GTEX-13FHP-0011-R5b-SM-5LZY2 17.1
GTEX-1445S-0011-R5a-SM-5PNUS 16.5
GTEX-13NZA-0011-R5b-SM-5KM4K 16.4
GTEX-139T8-0011-R5b-SM-5J1MO 12.6
GTEX-13CIG-0011-R5b-SM-5L3F2 9.6
GTEX-ZV68-0011-R5a-SM-4YCDW 7.9
GTEX-1477Z-0011-R5b-SM-5PNUO 6.0
GTEX-145MG-0011-R5b-SM-5S2VU 4.6
GTEX-S7PM-0011-R5A-SM-3NM8G 4.5
GTEX-11UD1-0011-R5b-SM-5P9FP 2.5
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

335.3

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 335.3
FF:10379-105H1 89 years, female 457.7
FF:10164-103B2 76 years, female 213.0

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