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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:212.6TPM
GTEx:35.1RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Low
Neuropil:Not detected
 

Antibody staining

Antibody HPA019472

 

Antibody CAB000075

 

Endothelial cells

Not detected   Not detected  

Glial cells

Not detected   Not detected  

Neuronal cells

Low   Not detected  

Neuropil

Not detected   Not detected  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

212.6

N/A Male, age 5
Sample 1
TPM: 511.5
overview Female, age 40
Sample 2
TPM: 37.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 88.4
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

35.1

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 34.2
Samples: 114

Max RPKM: 145.2
Min RPKM: 0
Std RPKM: 26.6
Median RPKM: 31.1
GTEX-WHSE-3026-SM-3P5ZH 145.2
GTEX-11OC5-0726-SM-5P9JK 119.5
GTEX-ZUA1-3026-SM-59HJC 98.8
GTEX-12126-1026-SM-5P9JJ 91.8
GTEX-XOTO-3026-SM-4B65M 83.1
GTEX-WZTO-2926-SM-3NM9I 80.2
GTEX-13PVQ-3026-SM-5SI93 78.0
GTEX-13SLX-3126-SM-5S2Q5 77.4
GTEX-T2IS-3026-SM-32QPM 74.1
GTEX-WL46-2926-SM-3LK82 73.5
GTEX-13FLW-1426-SM-5K7YE 68.0
GTEX-WVLH-3026-SM-3MJG9 67.7
GTEX-13OVH-3026-SM-5MR4N 67.5
GTEX-11NUK-2926-SM-5A5MD 67.4
GTEX-11ZUS-2926-SM-5FQSL 66.0
GTEX-Y111-2726-SM-4TT3N 63.5
GTEX-ZYFD-3026-SM-5E44C 62.5
GTEX-13VXU-2926-SM-5LU5C 57.9
GTEX-131YS-3126-SM-5KLYT 57.8
GTEX-14BMV-3026-SM-5S2PQ 57.7
GTEX-YFC4-3126-SM-5PNV6 56.8
GTEX-12ZZX-2926-SM-5GCOQ 54.4
GTEX-RNOR-2326-SM-2TF4I 54.4
GTEX-13OW6-3026-SM-5J2MI 53.2
GTEX-11DXY-3226-SM-5GIDE 52.2
GTEX-1313W-3126-SM-5LZUI 52.2
GTEX-12WSD-3126-SM-5HL7P 52.0
GTEX-13JUV-2926-SM-5LZX7 50.3
GTEX-13FHO-3026-SM-5J1O9 50.1
GTEX-12WSC-3026-SM-5GCNF 49.7
GTEX-145MH-3026-SM-5Q5DZ 48.3
GTEX-13FXS-3126-SM-5J2NN 47.2
GTEX-11GS4-3126-SM-5A5LH 46.2
GTEX-Q2AG-2926-SM-2HMJ3 45.1
GTEX-PVOW-2526-SM-2XCF7 44.6
GTEX-14ASI-3026-SM-5S2PN 43.5
GTEX-12ZZY-3026-SM-5GCOU 43.1
GTEX-145MG-3026-SM-5RQJA 42.4
GTEX-111FC-3126-SM-5GZZ2 42.2
GTEX-144GL-3026-SM-5Q5CW 42.0
GTEX-11WQK-3026-SM-5EQL6 41.8
GTEX-13O3Q-2926-SM-5KM45 40.4
GTEX-T5JC-2426-SM-3NMDB 39.7
GTEX-13X6J-3026-SM-5Q5CU 39.6
GTEX-11PRG-2926-SM-5987A 39.5
GTEX-11EMC-3226-SM-5EGKW 39.1
GTEX-T6MN-2626-SM-32PMQ 38.8
GTEX-13NYB-3026-SM-5IJD7 38.3
GTEX-13FHP-3026-SM-5IJBS 37.8
GTEX-12ZZZ-3026-SM-5BC67 37.7
GTEX-13OW8-2826-SM-5L3GC 37.1
GTEX-147GR-3026-SM-5S2ML 34.2
GTEX-145MF-2726-SM-5O995 33.9
GTEX-TSE9-3026-SM-3DB76 33.6
GTEX-11ONC-2926-SM-5P9JM 33.5
GTEX-139T8-1026-SM-5J2MC 32.8
GTEX-ZAK1-3026-SM-5S2MJ 31.4
GTEX-11GSO-2926-SM-5HL73 30.8
GTEX-YJ89-3026-SM-5IFJI 28.5
GTEX-Y8DK-0826-SM-4TT3T 26.5
GTEX-ZE7O-3126-SM-5HL5X 26.5
GTEX-OXRN-2426-SM-2I5EQ 25.8
GTEX-117XS-3026-SM-5N9CA 25.6
GTEX-ZAJG-3126-SM-5HL9J 24.9
GTEX-13O3O-3126-SM-5KM3H 23.7
GTEX-1399T-3026-SM-5KLZC 21.7
GTEX-13X6K-2926-SM-5Q5D5 21.0
GTEX-13OVJ-2826-SM-5L3GW 20.2
GTEX-13PL6-3126-SM-5LUAR 18.7
GTEX-13JVG-3126-SM-5L3FH 18.1
GTEX-1128S-2726-SM-5H12C 17.9
GTEX-12WSH-3026-SM-5CVNI 17.8
GTEX-13G51-3026-SM-5IJB8 17.2
GTEX-144FL-3026-SM-5O99C 16.7
GTEX-Z93S-2926-SM-57WB9 16.2
GTEX-XLM4-3026-SM-4AT6L 16.0
GTEX-N7MT-1126-SM-5SI7V 15.2
GTEX-131XW-3126-SM-5LZUC 15.0
GTEX-R55F-1326-SM-5S2V4 15.0
GTEX-13OW7-3026-SM-5L3GY 14.9
GTEX-14A5I-2926-SM-5Q5CQ 14.5
GTEX-145LS-3126-SM-5Q5BY 14.4
GTEX-13QIC-2926-SM-5J2NF 14.3
GTEX-11NV4-2126-SM-5N9DS 13.8
GTEX-13NYC-2826-SM-5K7WR 13.7
GTEX-13S7M-3126-SM-5RQJQ 13.7
GTEX-11DXW-1126-SM-5H12Q 13.2
GTEX-WWYW-3126-SM-3NB39 13.1
GTEX-NPJ7-2726-SM-2I3FT 11.6
GTEX-ZVT3-3026-SM-5E43N 10.5
GTEX-X585-3026-SM-46MWF 10.3
GTEX-11GSP-3226-SM-5986O 10.1
GTEX-11EI6-3026-SM-5GZZO 9.3
GTEX-QMR6-1426-SM-32PLA 9.0
GTEX-11O72-2926-SM-5BC4V 8.6
GTEX-1445S-3026-SM-5O9BR 8.2
GTEX-X4XX-3026-SM-3NMB2 8.1
GTEX-1117F-3226-SM-5N9CT 6.7
GTEX-1192X-3126-SM-5N9BY 6.6
GTEX-QVJO-1426-SM-2S1QY 6.5
GTEX-13NYS-3126-SM-5KLYV 5.9
GTEX-QVUS-2826-SM-3GADB 5.6
GTEX-RU72-3026-SM-5SI7Y 5.6
GTEX-132Q8-3026-SM-5PNVG 5.3
GTEX-QDT8-2926-SM-32PKC 5.3
GTEX-UTHO-3026-SM-3GAFB 4.7
GTEX-11TTK-2926-SM-5PNYP 4.3
GTEX-12ZZW-2926-SM-5LZUP 4.3
GTEX-PWO3-0926-SM-2I5EY 3.6
GTEX-NPJ8-1526-SM-2D7VU 3.3
GTEX-13IVO-2926-SM-5L3CZ 2.4
GTEX-ZZPT-3026-SM-5GZXH 2.1
GTEX-12WSA-2926-SM-5EQ4D 0.8
GTEX-11OF3-2926-SM-5HL78 0.0
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 36.1
Samples: 108

Max RPKM: 126.8
Min RPKM: 0.8
Std RPKM: 28.4
Median RPKM: 27.5
GTEX-ZUA1-0011-R10a-SM-51MT6 126.8
GTEX-13OVL-0011-R10a-SM-5L3GS 115.3
GTEX-12126-0011-R10b-SM-5BC6T 111.5
GTEX-131XH-0011-R10a-SM-5EGLJ 105.0
GTEX-WZTO-0011-R10B-SM-4E3KB 87.3
GTEX-12ZZY-0011-R10b-SM-5HL7W 86.9
GTEX-12WSE-0011-R10b-SM-5P9JV 86.6
GTEX-13SLX-0011-R10a-SM-5P9HV 80.7
GTEX-S7SE-0011-R10A-SM-2XCDF 79.1
GTEX-14BIN-0011-R10a-SM-5S2UA 77.1
GTEX-WVLH-0011-R10A-SM-3MJFM 76.1
GTEX-YFC4-0011-R10a-SM-4SOK5 75.8
GTEX-12WSC-0011-R10a-SM-5GU57 75.0
GTEX-ZVZQ-0011-R10b-SM-51MRT 74.4
GTEX-147GR-0011-R10b-SM-5S2UM 73.9
GTEX-145MH-0011-R10b-SM-5PNUK 72.4
GTEX-13N1W-0011-R10b-SM-5MR4H 72.2
GTEX-13O3O-0011-R10a-SM-5LUA9 68.2
GTEX-131YS-0011-R10b-SM-5EQ5N 66.1
GTEX-13FXS-0011-R10a-SM-5J2MA 65.5
GTEX-Q2AG-0011-R10A-SM-2HMLA 65.3
GTEX-13X6J-0011-R10b-SM-5PNWA 61.2
GTEX-12ZZX-0011-R10b-SM-5DUWK 58.3
GTEX-13NYB-0011-R10a-SM-5KM43 57.4
GTEX-13FLW-0011-R10b-SM-5LZZF 55.0
GTEX-13X6K-0011-R10a-SM-5P9JR 53.7
GTEX-13OW7-0011-R10a-SM-5L3H3 53.1
GTEX-1313W-0011-R10b-SM-5DUXA 52.3
GTEX-12WSM-0011-R10a-SM-5DUWV 52.1
GTEX-14ASI-0011-R10b-SM-5S2VZ 49.3
GTEX-13RTJ-0011-R10b-SM-5O9CW 47.1
GTEX-T5JC-0011-R10A-SM-32PM2 47.1
GTEX-Z93S-0011-R10a-SM-4RGNM 46.6
GTEX-13G51-0011-R10b-SM-5LZYF 46.4
GTEX-13FLV-0011-R10b-SM-5LZZ2 46.0
GTEX-WL46-0011-R10A-SM-3MJFQ 45.7
GTEX-13O3Q-0011-R10b-SM-5KM39 44.6
GTEX-N7MT-0011-R10A-SM-2I3E1 44.1
GTEX-13OW6-0011-R10a-SM-5L3HE 43.9
GTEX-12WSD-0011-R10b-SM-5GU79 43.2
GTEX-T6MN-0011-R10A-SM-32QP7 41.7
GTEX-13OW8-0011-R10a-SM-5L3H6 40.6
GTEX-12ZZZ-0011-R10a-SM-5P9HC 40.3
GTEX-145MG-0011-R10a-SM-5PNWG 38.7
GTEX-11ZUS-0011-R10b-SM-5BC79 37.4
GTEX-N7MS-0011-R10A-SM-2HMJK 37.0
GTEX-YJ89-0011-R10a-SM-4SOK9 36.9
GTEX-WWYW-0011-R10A-SM-3NB35 35.3
GTEX-TSE9-0011-R10A-SM-3DB7O 33.7
GTEX-13QIC-0011-R10a-SM-5O9C7 32.9
GTEX-Y8DK-0011-R10A-SM-4SOK1 32.0
GTEX-X4EP-0011-R10B-SM-4QASJ 30.8
GTEX-145LU-0011-R10a-SM-5PNWJ 30.7
GTEX-13QJC-0011-R10a-SM-5SI63 28.3
GTEX-11WQK-0011-R10a-SM-5BC6R 26.6
GTEX-13S7M-0011-R10b-SM-5PNZB 26.6
GTEX-12WSH-0011-R10a-SM-5LZUS 25.8
GTEX-13JUV-0011-R10b-SM-5LZXR 25.2
GTEX-13N2G-0011-R10a-SM-5MR34 24.8
GTEX-14BIL-0011-R10a-SM-5SI75 24.3
GTEX-13JVG-0011-R10b-SM-5KM2P 24.2
GTEX-ZDXO-0011-R10a-SM-4WWD8 23.7
GTEX-12WSF-0011-R10a-SM-5LZVH 21.1
GTEX-13OVJ-0011-R10b-SM-5L3HT 20.4
GTEX-11H98-0011-R10b-SM-5NQ98 20.2
GTEX-13CZV-0011-R10b-SM-5LZYD 20.0
GTEX-OXRO-0011-R10A-SM-2I5EH 19.2
GTEX-13NYS-0011-R10a-SM-5MR4S 18.9
GTEX-OXRN-0011-R10A-SM-2I5GC 18.9
GTEX-13NZA-0011-R10b-SM-5KM54 17.7
GTEX-ZE7O-0011-R10a-SM-57WAZ 17.0
GTEX-147F4-0011-R10b-SM-5S2WC 16.7
GTEX-NL3H-0011-R10A-SM-2I3E9 16.0
GTEX-11WQC-0011-R10a-SM-57WCT 15.9
GTEX-145LS-0011-R10a-SM-5PNUQ 14.1
GTEX-13FTZ-0011-R10b-SM-5KLZS 13.9
GTEX-13FHO-0011-R10b-SM-5J2MM 13.8
GTEX-13X6I-0011-R10a-SM-5PNWI 13.3
GTEX-139TS-0011-R10a-SM-5K7TU 12.8
GTEX-P44H-0011-R10A-SM-2XCEK 12.8
GTEX-132Q8-0011-R10b-SM-5DUWZ 12.7
GTEX-X585-0011-R10A-SM-46MUY 12.4
GTEX-ZAB4-0011-R10a-SM-4SOKH 12.4
GTEX-XLM4-0011-R10A-SM-4AT5P 11.9
GTEX-RVPU-0011-R10A-SM-2XCAH 11.3
GTEX-QVUS-0011-R10A-SM-3GIK3 10.9
GTEX-X261-0011-R10B-SM-4E3JT 10.6
GTEX-NPJ7-0011-R10A-SM-2I3E5 10.3
GTEX-ZXG5-0011-R10a-SM-57WDD 9.5
GTEX-11GSP-0011-R10a-SM-5NQ7J 9.4
GTEX-ZF28-0011-R10a-SM-4WWEH 9.3
GTEX-QMR6-0011-R10A-SM-32PKO 9.2
GTEX-X4XX-0011-R10B-SM-46MWO 8.3
GTEX-QVJO-0011-R10A-SM-2S1QJ 8.1
GTEX-XMD1-0011-R10A-SM-4AT4A 7.2
GTEX-ZVT3-0011-R10b-SM-57WB6 7.2
GTEX-14753-0011-R10b-SM-5S2WE 7.1
GTEX-NL4W-0011-R10A-SM-2I3DY 7.0
GTEX-1477Z-0011-R10b-SM-5S2RF 5.5
GTEX-1445S-0011-R10a-SM-5PNWB 5.2
GTEX-131XW-0011-R10a-SM-5DUVA 4.4
GTEX-NPJ8-0011-R10A-SM-2YUMO 4.3
GTEX-ZV68-0011-R10a-SM-51MT7 4.0
GTEX-QDT8-0011-R10A-SM-32PKG 3.9
GTEX-12ZZW-0011-R10b-SM-5HL9X 3.0
GTEX-13SLW-0011-R10a-SM-5S2UI 1.9
GTEX-13IVO-0011-R10a-SM-5LZY3 1.8
GTEX-12WSA-0011-R10b-SM-5P9ET 0.8
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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