Tissue expression of SLC13A3 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	1.3	TPM
GTEx:	0.5	RPKM
FANTOM5:	0.7	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Not detected
Chondrocytes:	Not detected

Antibody staining	Antibody HPA014353	Antibody HPA014736
Adipocytes	Not detected	Not detected
Fibroblasts	Not detected	Not detected
Peripheral nerve	Not detected	Not detected
Chondrocytes	Low

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA014353	Antibody HPA014736
Adipocytes	Not detected	Not detected
Fibroblasts	Not detected	Not detected
Peripheral nerve	Not detected	Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	1.3

Female, age 80

Sample 1
TPM: 1.4

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 0.5

Female, age 57

Sample 3
TPM: 1.3

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 1.5

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 1.6

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	0.5

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 0.5

Samples: 350

Max RPKM: 1.7
Min RPKM: 0.1
Std RPKM: 0.2
Median RPKM: 0.4

GTEX-W5X1-2626-SM-4LMI8

1.7

GTEX-TSE9-0226-SM-3DB84

1.4

GTEX-13PLJ-0126-SM-5L3HU

1.3

GTEX-11ONC-2526-SM-5986W

1.2

GTEX-REY6-0326-SM-2TF5A

1.2

GTEX-XOTO-0226-SM-4B66H

1.2

GTEX-139TU-0226-SM-5J1NM

1.1

GTEX-13SLX-0426-SM-5QGRC

1.1

Show all

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 0.5

Samples: 227

Max RPKM: 2.5
Min RPKM: 0
Std RPKM: 0.3
Median RPKM: 0.4

GTEX-XLM4-1026-SM-4AT51

2.5

GTEX-11DXY-0326-SM-5H12F

2.1

GTEX-13O3P-0926-SM-5IFFI

1.7

GTEX-11NUK-2026-SM-5PNVZ

1.6

GTEX-12ZZW-2326-SM-5DUW2

1.6

GTEX-13G51-0526-SM-5IJCQ

1.5

GTEX-14DAQ-2526-SM-5RQIO

1.5

GTEX-WYVS-0626-SM-4SOJY

1.5

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	0.7

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 0.7

FF:10010-101C1

65,65,76 years, mixed

0.7