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TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:68.0TPM
GTEx:39.4RPKM
FANTOM5:23.6Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Low
Cells in white pulp:High
 

Antibody staining

Antibody HPA065257

 

Antibody HPA066762

 

Cells in red pulp

Low   Low  

Cells in white pulp

High   Medium  
   
   
   

SPLEEN - HPA RNA-seq

Average TPM

68.0

overview Female, age 60
Sample 1
TPM: 74.3
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 57.8
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 61.9
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 114.9
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 31.5
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

39.4

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 39.4
Samples: 104

Max RPKM: 108
Min RPKM: 11.2
Std RPKM: 13.7
Median RPKM: 36.9
GTEX-X585-1826-SM-4QAS3 108.0
GTEX-12WSJ-0526-SM-5GCOZ 77.4
GTEX-P4QS-0926-SM-48TBS 70.2
GTEX-YB5K-1926-SM-4VDT4 69.4
GTEX-X3Y1-0126-SM-4PQZA 64.7
GTEX-UPK5-1626-SM-4JBHI 62.4
GTEX-OIZH-0926-SM-48TBR 61.7
GTEX-Y3I4-0126-SM-4TT26 61.7
GTEX-S3XE-0626-SM-4AD6B 60.6
GTEX-PLZ6-0126-SM-48TC6 60.2
GTEX-Z9EW-0726-SM-5HL9H 54.7
GTEX-R55G-0226-SM-48FEI 54.6
GTEX-XQ8I-1726-SM-4BOQB 54.5
GTEX-XXEK-0126-SM-4BRVU 53.5
GTEX-WFON-0126-SM-4LVM9 52.3
GTEX-X4LF-0226-SM-4QAS8 50.9
GTEX-11DXX-0726-SM-5H12X 50.7
GTEX-POMQ-0126-SM-48TD6 50.5
GTEX-S4Z8-0226-SM-4AD5K 49.4
GTEX-XGQ4-0126-SM-4AT4H 49.0
GTEX-U4B1-0526-SM-4DXTK 48.9
GTEX-QMRM-0226-SM-4R1K7 47.9
GTEX-QLQW-0126-SM-447BK 46.5
GTEX-XUJ4-0226-SM-4BOP8 46.5
GTEX-144GN-2126-SM-5O99D 46.2
GTEX-U3ZN-0126-SM-4DXUM 46.2
GTEX-Q734-0226-SM-48U1A 46.0
GTEX-11NSD-0426-SM-5N9CR 44.4
GTEX-11P81-1326-SM-5GU5S 44.1
GTEX-XV7Q-0126-SM-4BRVK 43.8
GTEX-O5YT-0926-SM-48TDG 43.0
GTEX-ZVP2-0526-SM-51MSC 42.8
GTEX-T5JW-0126-SM-4DM6K 41.9
GTEX-ZDTT-1026-SM-5KM19 41.9
GTEX-QV31-0126-SM-447BP 41.8
GTEX-13N11-0126-SM-5KM2Z 41.0
GTEX-1399S-0226-SM-5IFFG 40.7
GTEX-ZVZP-0726-SM-59HKA 40.4
GTEX-OOBJ-0926-SM-48TDO 40.2
GTEX-W5WG-0626-SM-4SOID 39.8
GTEX-146FQ-0626-SM-5LU9U 39.7
GTEX-QDVN-0526-SM-48TZ4 39.7
GTEX-UJHI-0126-SM-4IHLP 39.7
GTEX-12WSG-0926-SM-5EGIH 38.9
GTEX-Q2AH-0226-SM-48U1I 38.3
GTEX-RUSQ-0126-SM-47JWV 38.3
GTEX-11P7K-0426-SM-5BC5H 38.1
GTEX-11LCK-0126-SM-5A5M5 37.8
GTEX-13CF3-0226-SM-5J1NW 37.6
GTEX-131XG-0426-SM-5IFGD 37.2
GTEX-PW2O-0126-SM-48TC8 37.1
GTEX-13PVR-0326-SM-5RQJY 37.0
GTEX-12WSK-0126-SM-5GCO7 36.9
GTEX-139T6-0226-SM-5IFGZ 36.3
GTEX-145MN-0126-SM-5RQHY 36.2
GTEX-132QS-0226-SM-5IFFZ 35.7
GTEX-U3ZH-0126-SM-4DXUK 35.6
GTEX-13VXT-1326-SM-5LU3Y 35.4
GTEX-14DAR-0326-SM-5S2PS 35.4
GTEX-ZPU1-1026-SM-4YCEQ 35.4
GTEX-YB5E-0426-SM-5IFHR 35.3
GTEX-13PL7-1126-SM-5MR5O 35.0
GTEX-14E6E-1226-SM-5S2R5 34.9
GTEX-13111-0126-SM-5EGHO 34.4
GTEX-XAJ8-0126-SM-47JYG 34.1
GTEX-YFCO-0926-SM-5LUA5 34.0
GTEX-147F3-0126-SM-5NQBJ 33.1
GTEX-ZV6S-0826-SM-5NQ6Z 32.5
GTEX-13X6H-0726-SM-5Q5BX 32.4
GTEX-12WSN-0126-SM-5DUX5 32.3
GTEX-P4PP-0926-SM-48TBZ 32.2
GTEX-WHWD-0126-SM-4OORS 32.2
GTEX-ZYFG-0726-SM-5GIDX 32.2
GTEX-1122O-0526-SM-5N9DM 32.0
GTEX-QCQG-0226-SM-48U28 31.6
GTEX-Y8LW-0126-SM-4VBS1 31.3
GTEX-ZLFU-0526-SM-4WWBN 31.0
GTEX-PX3G-0926-SM-48U12 30.6
GTEX-11XUK-0426-SM-5EQML 30.5
GTEX-12BJ1-0726-SM-5EGGF 30.5
GTEX-131XE-1126-SM-5EGHW 30.2
GTEX-13S86-0126-SM-5S2PI 30.0
GTEX-Y114-0726-SM-4TT6U 29.9
GTEX-XPVG-0626-SM-4B65B 29.6
GTEX-YEC4-0126-SM-4W21T 29.3
GTEX-VJYA-0126-SM-4KL1P 28.8
GTEX-ZYWO-0226-SM-5GZX3 28.8
GTEX-ZAB5-0526-SM-5CVMU 28.6
GTEX-1211K-0426-SM-5FQTP 28.0
GTEX-1399R-0226-SM-5IJGG 28.0
GTEX-11VI4-0126-SM-5GU6Z 27.9
GTEX-QV44-0126-SM-4R1KH 27.5
GTEX-XMK1-0126-SM-4B65F 26.7
GTEX-13FH7-1326-SM-5IFG8 26.4
GTEX-Y5LM-0326-SM-4VBRN 26.3
GTEX-11EQ9-0426-SM-5A5JY 26.2
GTEX-139YR-0426-SM-5IFFV 26.1
GTEX-ZZPU-0126-SM-5E446 25.1
GTEX-117YX-2126-SM-5GIEL 24.0
GTEX-ZP4G-0326-SM-4YCEF 22.8
GTEX-146FR-1926-SM-5NQA6 21.1
GTEX-Y3IK-0126-SM-4WWE9 16.3
GTEX-13U4I-1626-SM-5IFFR 13.1
GTEX-ZLWG-0426-SM-4WWFA 11.2
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

23.6

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 23.6
FF:10025-101D7 39,50,70 years, male 23.6

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