Fields »
ABOUT
HELP
BLOG
VCAM1

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:27.5TPM
GTEx:15.7RPKM
FANTOM5:29.7Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
Adipocytes:Not detected
 

Antibody staining

Antibody HPA034796

  

Antibody CAB000154

  

Chondrocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected  

Adipocytes

 Not detected  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
Chondrocytes:Not detected
 

Antibody staining

Antibody HPA034796

  

Antibody CAB000154

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected  

Chondrocytes

 Not detected  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

27.5
N/A Female, age 80
Sample 1
TPM: 16.9
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 6.0
N/A Female, age 57
Sample 3
TPM: 5.5
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 52.6
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 56.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

15.7

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 12.8
Samples: 350

Max RPKM: 73.5
Min RPKM: 0.9
Std RPKM: 12.1
Median RPKM: 9.2
GTEX-ZE7O-0226-SM-5S2N1 73.5
GTEX-13NZB-2426-SM-5K7UF 71.5
GTEX-ZYFD-0226-SM-5NQ86 70.8
GTEX-13N1W-0226-SM-5K7W6 65.2
GTEX-WI4N-1126-SM-3LK7Q 64.9
GTEX-11ZU8-2426-SM-5EQMV 58.9
GTEX-11UD2-0126-SM-5EQL2 58.5
GTEX-RVPU-2326-SM-2TF6R 55.0
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 20.0
Samples: 227

Max RPKM: 135
Min RPKM: 3.1
Std RPKM: 14.9
Median RPKM: 16.1
GTEX-13N1W-1226-SM-5K7UM 135.0
GTEX-13JUV-0626-SM-5J1MQ 77.0
GTEX-133LE-0926-SM-5P9J1 76.6
GTEX-12WSK-1026-SM-5CVNR 71.9
GTEX-13O3P-0926-SM-5IFFI 66.6
GTEX-11WQK-1526-SM-5EGKN 64.4
GTEX-13O61-1926-SM-5KM1R 61.3
GTEX-ZYW4-2226-SM-5GZYG 57.5
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

29.7

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 29.7
FF:10010-101C1 65,65,76 years, mixed 29.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.