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SGCB

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:34.1TPM
GTEx:15.6RPKM
FANTOM5:18.4Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Medium
 
 

Antibody staining

Antibody HPA011422

  

Adipocytes

 Not detected  

Fibroblasts

 Medium  
    
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA011422

  

Adipocytes

 Not detected  

Fibroblasts

 Low  

Peripheral nerve

 Not detected  
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

34.1
N/A Female, age 80
Sample 1
TPM: 32.0
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 43.2
N/A Female, age 57
Sample 3
TPM: 34.5
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 30.2
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 30.8
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

15.6

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 15.8
Samples: 350

Max RPKM: 33.2
Min RPKM: 6.1
Std RPKM: 4.3
Median RPKM: 15.3
GTEX-ZDTT-2626-SM-5S2OP 33.2
GTEX-S33H-1126-SM-2XCB6 32.5
GTEX-SNMC-1326-SM-2XCFK 30.8
GTEX-O5YT-0226-SM-32PK5 29.6
GTEX-NFK9-0326-SM-3MJGV 29.4
GTEX-12126-0426-SM-5Q5AP 26.8
GTEX-QMRM-1726-SM-2S1QG 26.8
GTEX-14DAR-1926-SM-5S2NQ 26.5
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 15.3
Samples: 227

Max RPKM: 25.8
Min RPKM: 7.1
Std RPKM: 3.8
Median RPKM: 14.9
GTEX-12ZZX-1726-SM-5BC63 25.8
GTEX-WFJO-1026-SM-3GIKL 25.8
GTEX-13OW7-1126-SM-5K7V6 24.8
GTEX-X585-2526-SM-4QAS1 24.2
GTEX-ZF2S-1526-SM-5S2OO 23.5
GTEX-146FH-2026-SM-5SI9I 23.3
GTEX-1313W-1626-SM-5J1OE 23.0
GTEX-12WSL-1126-SM-5CVNK 22.9
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

18.4

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 18.4
FF:10010-101C1 65,65,76 years, mixed 18.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.