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TISSUE ATLAS PRIMARY DATA KIDNEY
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Kidney

Tissue proteome

Kidney

KIDNEY - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:7.0TPM
GTEx:60.7RPKM
FANTOM5:125.3Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:Not detected
Cells in tubules:High
 

Antibody staining

Antibody HPA008001

 

Antibody CAB025518

 

Cells in glomeruli

Not detected   Not detected  

Cells in tubules

High   High  
   
   
   

KIDNEY - HPA RNA-seq

Average TPM

7.0

overview Female, age 58
Sample 1
TPM: 15.3
Cell types%
Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15
overview Female, age 67
Sample 2
TPM: 7.6
Cell types%
Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 55
Sample 3
TPM: 9.2
Cell types%
Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5
overview Male, age 46
Sample 4
TPM: 11.2
Cell types%
Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10
overview Female, age 57
Sample 5
TPM: 1.6
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 6
TPM: 3.5
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20
overview Male, age 73
Sample 7
TPM: 5.3
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Female, age 59
Sample 8
TPM: 6.9
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15
overview Female, age 48
Sample 9
TPM: 2.8
Cell types%
Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM

60.7

GTEx sample id

RPKM

 

Kidney - Cortex

Kidney - Cortex
RPKM: 60.7
Samples: 32

Max RPKM: 109.9
Min RPKM: 18
Std RPKM: 23.3
Median RPKM: 64.3
GTEX-145MN-0326-SM-5QGQI 109.9
GTEX-ZYFG-1626-SM-5GZYY 102.6
GTEX-ZLFU-0926-SM-5P9F8 98.1
GTEX-ZVZP-0926-SM-5GIDB 89.9
GTEX-ZYT6-2226-SM-5GIC9 84.5
GTEX-13OVI-1126-SM-5KLZF 80.0
GTEX-147F4-2626-SM-5Q5CS 77.4
GTEX-QDVN-1626-SM-48TZC 75.0
GTEX-1497J-0826-SM-5NQAJ 74.4
GTEX-1399S-0526-SM-5IJG8 72.5
GTEX-QLQW-1626-SM-4R1K1 70.7
GTEX-12WSG-0826-SM-5EQ5A 70.4
GTEX-UPIC-1126-SM-4IHLO 69.1
GTEX-13112-2126-SM-5GCO4 66.0
GTEX-11TTK-1926-SM-5PNW8 65.4
GTEX-12696-0926-SM-5FQTV 65.1
GTEX-13RTJ-2226-SM-5S2Q1 63.6
GTEX-P4QS-1126-SM-3NMD5 61.9
GTEX-XPVG-0526-SM-4B65N 57.7
GTEX-Y5V6-2026-SM-5IFHO 57.7
GTEX-RN64-1626-SM-48FD7 49.6
GTEX-13NYB-1726-SM-5N9G2 48.3
GTEX-13OVL-1826-SM-5KLZR 47.4
GTEX-13OW6-1826-SM-5N9F9 44.8
GTEX-11GS4-2326-SM-5A5KS 43.5
GTEX-ZC5H-1726-SM-5HL7X 41.9
GTEX-11OF3-1326-SM-5N9FJ 33.5
GTEX-T5JC-1526-SM-4DM68 31.8
GTEX-13O1R-2526-SM-5N9FW 27.8
GTEX-N7MS-1626-SM-3LK5F 24.6
GTEX-NPJ8-2226-SM-3TW8D 19.0
GTEX-ZYFD-1526-SM-5NQ7T 18.0
Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million

125.3

FANTOM5 sample id

Sample description

Tags Per Million

Kidney
Tags Per Million: 125.3
FF:10017-101C8 60,62,63 years, female 125.3

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