Tissue expression of HPGD - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	72.6	TPM
GTEx:	26.1	RPKM
FANTOM5:	113.0	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Not detected

Antibody staining	Antibody HPA004919	Antibody HPA005679
Squamous epithelial cells	Low	Not detected

ESOPHAGUS - HPA RNA-seq

Average TPM	72.6

Female, age 70

Sample 1
TPM: 50.3

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 58.4

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 109.2

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	26.1

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 26.1

Samples: 286

Max RPKM: 97.8
Min RPKM: 1.7
Std RPKM: 19
Median RPKM: 20.8

GTEX-QV44-1126-SM-4R1KO

97.8

GTEX-117YX-1626-SM-5GZZG

90.5

GTEX-RM2N-0726-SM-48FD5

83.8

GTEX-P4PQ-0626-SM-3NMCU

83.6

GTEX-12BJ1-1626-SM-5HL8Y

80.9

GTEX-Y5LM-1026-SM-4VDSQ

79.5

GTEX-ZG7Y-1126-SM-4WWEZ

78.0

GTEX-1122O-1726-SM-5GICM

72.5

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	113.0

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 113.0

FF:10015-101C6

68,74,75 years, mixed

113.0