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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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HSP90B1
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TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

HSP90B1

Gene description

Heat shock protein 90kDa beta (Grp94), member 1

Protein class

Cancer-related genes
Plasma proteins
Predicted intracellular proteins
Predicted secreted proteins

Predicted localization

Intracellular,Secreted

Number of transcripts

4
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Expressed in all
GTEx:Expressed in all
FANTOM5:Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Widely distributed cytoplasmic staining.

DATA RELIABILITY

Data reliability
description

Antibody staining consistent with RNA expression data.

Reliability score

Supported based on 3 antibodies.
HPA003901 , HPA008424 , CAB005224
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
Adrenal gland
Bone marrow & immune system
Appendix
Bone marrow
Lymph node
Tonsil
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
Bronchus
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
Esophagus
Stomach
Duodenum
Small intestine
Colon
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Thyroid gland

Lymph node

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all

GENE INFORMATION

Gene name

HSP90B1 (HGNC Symbol)

Synonyms

GP96, GRP94, TRA1

Description

Heat shock protein 90kDa beta (Grp94), member 1 (HGNC Symbol)

Entrez gene summary

This gene encodes a member of a family of adenosine triphosphate(ATP)-metabolizing molecular chaperones with roles in stabilizing and folding other proteins. The encoded protein is localized to melanosomes and the endoplasmic reticulum. Expression of this protein is associated with a variety of pathogenic states, including tumor formation. There is a microRNA gene located within the 5' exon of this gene. There are pseudogenes for this gene on chromosomes 1 and 15. [provided by RefSeq, Aug 2012]

Chromosome

12

Cytoband

q23.3

Chromosome location (bp)

103930107 - 103953645

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000166598 (version 83.38)

Entrez gene

7184

UniProt

P14625 (UniProt - Evidence at protein level)

neXtProt

NX_P14625

Antibodypedia

HSP90B1 antibodies

PROTEIN BROWSER

HSP90B1-001
HSP90B1-006
HSP90B1-012
HSP90B1-201

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

HSP90B1-001
ENSP00000299767
ENST00000299767
P14625 [Direct mapping]
Endoplasmin
V9HWP2 [Target identity:100%; Query identity:100%]
Epididymis luminal protein 35; Epididymis secretory sperm binding protein Li 125m; Heat shock protein 90kDa beta (Grp94), member 1, isoform CRA_b
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Plasma proteins
Cancer-related genes
   Candidate cancer biomarkers
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001666 [response to hypoxia]
GO:0002224 [toll-like receptor signaling pathway]
GO:0003723 [RNA binding]
GO:0005509 [calcium ion binding]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005576 [extracellular region]
GO:0005634 [nucleus]
GO:0005783 [endoplasmic reticulum]
GO:0005788 [endoplasmic reticulum lumen]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0005925 [focal adhesion]
GO:0006457 [protein folding]
GO:0006898 [receptor-mediated endocytosis]
GO:0006950 [response to stress]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0019903 [protein phosphatase binding]
GO:0030433 [ER-associated ubiquitin-dependent protein catabolic process]
GO:0030496 [midbody]
GO:0030968 [endoplasmic reticulum unfolded protein response]
GO:0030970 [retrograde protein transport, ER to cytosol]
GO:0031012 [extracellular matrix]
GO:0031247 [actin rod assembly]
GO:0034663 [endoplasmic reticulum chaperone complex]
GO:0034975 [protein folding in endoplasmic reticulum]
GO:0034976 [response to endoplasmic reticulum stress]
GO:0036500 [ATF6-mediated unfolded protein response]
GO:0042470 [melanosome]
GO:0043066 [negative regulation of apoptotic process]
GO:0043666 [regulation of phosphoprotein phosphatase activity]
GO:0044267 [cellular protein metabolic process]
GO:0045087 [innate immune response]
GO:0046790 [virion binding]
GO:0048471 [perinuclear region of cytoplasm]
GO:0050750 [low-density lipoprotein particle receptor binding]
GO:0051082 [unfolded protein binding]
GO:0051208 [sequestering of calcium ion]
GO:0070062 [extracellular exosome]
GO:0071318 [cellular response to ATP]
GO:0071682 [endocytic vesicle lumen]
Show all
803 aa
92.5 kDa
Yes 0
HSP90B1-006
ENSP00000446748
ENST00000549334
F8W026 [Direct mapping]
Endoplasmin
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005524 [ATP binding]
GO:0006457 [protein folding]
GO:0006950 [response to stress]
GO:0051082 [unfolded protein binding]
Show all
49 aa
5.6 kDa
No 0
HSP90B1-012
ENSP00000450215
ENST00000550595
H0YIV0 [Direct mapping]
Endoplasmin
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005524 [ATP binding]
GO:0006457 [protein folding]
GO:0006950 [response to stress]
GO:0051082 [unfolded protein binding]
Show all
147 aa
16.9 kDa
No 0
HSP90B1-201
ENSP00000477660
ENST00000614327
Q96GW1 [Direct mapping]
Endoplasmin; HSP90B1 protein
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005524 [ATP binding]
GO:0006457 [protein folding]
GO:0006950 [response to stress]
GO:0051082 [unfolded protein binding]
Show all
315 aa
35.4 kDa
Yes 0

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