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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:14.4TPM
GTEx:10.3RPKM
FANTOM5:16.5Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA003357

  

Antibody CAB010245

  

Adipocytes

 Not detected   Low  

Fibroblasts

 Not detected  

Peripheral nerve

 Not detected  
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Low
Peripheral nerve:Low
 

Antibody staining

Antibody HPA003357

  

Antibody CAB010245

  

Adipocytes

 Not detected   Low  

Chondrocytes

 Not detected  

Fibroblasts

 Not detected   Medium  

Peripheral nerve

 Low  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

14.4
N/A Female, age 80
Sample 1
TPM: 23.9
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 11.5
N/A Female, age 57
Sample 3
TPM: 12.1
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 10.9
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 13.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

10.3

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 10.8
Samples: 350

Max RPKM: 16.5
Min RPKM: 5
Std RPKM: 2.1
Median RPKM: 10.9
GTEX-XOTO-0226-SM-4B66H 16.5
GTEX-ZPU1-2426-SM-4WWFM 16.0
GTEX-REY6-0326-SM-2TF5A 15.7
GTEX-XBEC-0326-SM-4AT4M 15.4
GTEX-13OW8-1226-SM-5K7XD 15.3
GTEX-13X6K-0226-SM-5QGPB 15.3
GTEX-X4XY-0326-SM-46MVZ 15.2
GTEX-13QJ3-0426-SM-5RQHP 15.0
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 9.6
Samples: 227

Max RPKM: 14.6
Min RPKM: 4.9
Std RPKM: 1.9
Median RPKM: 9.6
GTEX-13OVL-0826-SM-5L3GV 14.6
GTEX-12WSI-1526-SM-5GCNM 14.5
GTEX-14BIN-1226-SM-5S2OM 13.9
GTEX-13OW7-1126-SM-5K7V6 13.8
GTEX-14DAQ-2526-SM-5RQIO 13.7
GTEX-14ICL-0926-SM-5S2TU 13.7
GTEX-WK11-2426-SM-3NMAA 13.7
GTEX-145LU-1226-SM-5LU9B 13.6
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

16.5

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 16.5
FF:10010-101C1 65,65,76 years, mixed 16.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.