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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:223.9TPM
GTEx:54.3RPKM
FANTOM5:51.1Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Medium
Myoepithelial cells:Low
 

Antibody staining

Antibody HPA011101

 

Antibody CAB018969

 

Adipocytes

Not detected   Low  

Glandular cells

Medium   Low  

Myoepithelial cells

Low   Low  
   
   
   

BREAST - HPA RNA-seq

Average TPM

223.9

overview Female, age 52
Sample 1
TPM: 154.9
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 170.9
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 428.6
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 141.3
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

54.3

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 54.3
Samples: 214

Max RPKM: 373
Min RPKM: 0.6
Std RPKM: 57.2
Median RPKM: 43
GTEX-14ABY-2126-SM-5QGQZ 373.0
GTEX-145LT-0726-SM-5S2VM 208.4
GTEX-13NZB-2126-SM-5MR4Y 205.8
GTEX-11PRG-0826-SM-5EQ6A 203.4
GTEX-QEG5-0726-SM-4R1JQ 194.1
GTEX-139T8-0826-SM-5L3DE 183.8
GTEX-13FTY-2226-SM-5J1ND 172.0
GTEX-WYBS-0926-SM-3NM94 165.7
GTEX-ZC5H-2626-SM-5J2MG 158.2
GTEX-T5JC-2126-SM-32PMO 151.6
GTEX-ZVT2-1826-SM-5NQ8W 148.7
GTEX-XUZC-1626-SM-4BRVP 147.2
GTEX-ZU9S-1926-SM-5NQBP 141.7
GTEX-SIU7-1626-SM-4BRUK 140.9
GTEX-ZF2S-2026-SM-5E461 140.1
GTEX-11TT1-2126-SM-5GU5Y 139.2
GTEX-13NZ9-1026-SM-5MR5K 138.5
GTEX-YFC4-1426-SM-5IFJG 137.7
GTEX-ZXES-0826-SM-5E43C 137.4
GTEX-11P7K-0726-SM-5EGKX 135.4
GTEX-VUSG-2226-SM-4KKZO 134.6
GTEX-13CF2-2026-SM-5K7VI 133.7
GTEX-T2IS-1526-SM-32QPR 133.1
GTEX-14AS3-1626-SM-5S2OY 130.7
GTEX-13PL6-2926-SM-5L3I2 127.7
GTEX-XOT4-0726-SM-4GIAW 126.0
GTEX-11GS4-2126-SM-5A5KR 123.4
GTEX-131YS-0626-SM-5EGKL 123.4
GTEX-131XW-0726-SM-5EGK3 123.0
GTEX-147F4-2826-SM-5NQBN 121.5
GTEX-R3RS-0626-SM-48FE1 119.4
GTEX-11EMC-2026-SM-5A5JV 119.3
GTEX-13OW5-2226-SM-5L3HC 116.8
GTEX-ZY6K-1626-SM-5GZWV 116.4
GTEX-ZVTK-0326-SM-51MRR 113.7
GTEX-12ZZX-1126-SM-5EGKB 112.8
GTEX-111YS-1926-SM-5GICC 111.5
GTEX-QEL4-2126-SM-447AE 110.9
GTEX-R55F-1726-SM-2TF4R 109.3
GTEX-WYVS-1726-SM-3NMAY 108.7
GTEX-Q2AG-0326-SM-48U1O 107.3
GTEX-Y3IK-2326-SM-4WWDT 107.0
GTEX-X15G-1626-SM-3NMB3 104.8
GTEX-U412-1826-SM-4DXTJ 103.1
GTEX-11DXW-0626-SM-5N9ER 102.3
GTEX-U3ZH-1426-SM-4DXSR 100.5
GTEX-T6MN-0726-SM-32PML 100.3
GTEX-13QIC-2326-SM-5LU5N 98.2
GTEX-ZTTD-1026-SM-51MRD 98.0
GTEX-RU72-0626-SM-46MUI 97.9
GTEX-QDT8-0626-SM-48TYW 96.0
GTEX-1399U-1826-SM-5PNZ1 93.3
GTEX-S341-1526-SM-4AD6K 93.3
GTEX-13N11-1726-SM-5J1OJ 92.3
GTEX-13O3O-0826-SM-5K7WE 91.5
GTEX-ZVE2-1226-SM-5NQ8R 90.6
GTEX-ZTX8-1226-SM-4YCE9 90.1
GTEX-11EM3-1326-SM-5N9C6 89.0
GTEX-11WQC-1726-SM-5GU4W 86.8
GTEX-133LE-1726-SM-5K7VQ 86.6
GTEX-X4EP-2926-SM-3P5YQ 86.2
GTEX-ZAJG-0626-SM-5HL8X 85.9
GTEX-T5JW-2026-SM-4DM63 84.0
GTEX-1269C-2426-SM-5FQSN 83.8
GTEX-UPK5-2326-SM-3P5Z8 82.7
GTEX-13O3P-0826-SM-5L3DH 82.1
GTEX-Y111-2026-SM-4SOJA 79.9
GTEX-WYJK-1326-SM-3NB2T 75.6
GTEX-ZF29-1926-SM-5S2P1 75.1
GTEX-VJWN-0726-SM-3GIJ8 74.2
GTEX-ZLV1-1426-SM-4WWES 73.2
GTEX-1192X-2326-SM-5987X 71.7
GTEX-13FHO-0826-SM-5L3E8 71.5
GTEX-XUJ4-1926-SM-4BOOV 71.1
GTEX-ZV7C-1826-SM-5NQ83 70.6
GTEX-13D11-1026-SM-5IJFB 69.5
GTEX-XMD2-0926-SM-4WWEF 69.0
GTEX-SE5C-2126-SM-4BRUJ 67.8
GTEX-XBED-1626-SM-47JYN 66.4
GTEX-Y5LM-1726-SM-4VDSX 66.4
GTEX-ZZPU-0626-SM-5E43T 65.0
GTEX-UJHI-1426-SM-3DB9C 61.7
GTEX-132Q8-1426-SM-5EGK7 60.8
GTEX-S4P3-1326-SM-4AD6V 60.5
GTEX-Y5V5-2126-SM-4WWFO 59.4
GTEX-XMD1-0826-SM-4AT52 57.5
GTEX-11EI6-0626-SM-5985T 57.1
GTEX-RWS6-1926-SM-47JXY 56.5
GTEX-13W3W-1226-SM-5LU4H 54.7
GTEX-S4UY-0726-SM-4AD6X 54.5
GTEX-13NZ8-0126-SM-5IJCT 53.8
GTEX-XYKS-1326-SM-4BRUN 53.8
GTEX-11P81-1926-SM-5BC53 53.6
GTEX-WRHU-0326-SM-3MJFY 53.6
GTEX-WXYG-2226-SM-4E3IM 53.2
GTEX-T6MO-0326-SM-32QOK 51.0
GTEX-1314G-1226-SM-5BC6D 50.4
GTEX-Y8LW-1626-SM-5IFHX 49.0
GTEX-1313W-0826-SM-5EQ4T 48.4
GTEX-145MO-0826-SM-5NQBL 48.1
GTEX-XUW1-2326-SM-4BOO5 47.9
GTEX-U3ZN-1926-SM-4DXSG 46.9
GTEX-139TU-0626-SM-5KM3X 46.8
GTEX-TMMY-0726-SM-33HBE 46.5
GTEX-T2YK-2226-SM-32QPT 45.7
GTEX-WI4N-1426-SM-3LK7H 45.6
GTEX-ZEX8-2226-SM-57WC6 43.3
GTEX-ZF3C-2326-SM-5S2MZ 42.8
GTEX-ZVZQ-0826-SM-51MRF 41.9
GTEX-Y114-2026-SM-4TT7L 40.1
GTEX-13113-1726-SM-5GCOO 39.2
GTEX-TML8-1226-SM-32QON 37.0
GTEX-1211K-1926-SM-5EQLB 36.4
GTEX-ZYWO-2326-SM-5GZY4 36.4
GTEX-ZVT4-1026-SM-57WC4 34.5
GTEX-X261-0626-SM-3NMD9 32.7
GTEX-1122O-1226-SM-5H113 31.9
GTEX-146FH-0826-SM-5SI8T 30.1
GTEX-1117F-2826-SM-5GZXL 29.8
GTEX-11I78-2226-SM-5PNYA 29.0
GTEX-11LCK-2426-SM-5HL5F 28.7
GTEX-YB5K-1626-SM-5IFIN 25.5
GTEX-W5X1-2326-SM-3GIL6 23.8
GTEX-ZPIC-1126-SM-5BC7F 21.4
GTEX-QVJO-1826-SM-447C9 20.3
GTEX-13OW8-0226-SM-5K7UP 20.2
GTEX-R53T-1526-SM-48FEK 20.0
GTEX-Y3I4-1526-SM-4TT7K 19.5
GTEX-11NSD-0926-SM-5N9DR 19.3
GTEX-WOFL-0826-SM-3MJG1 19.0
GTEX-12WSK-2226-SM-5GCO5 17.8
GTEX-S33H-0326-SM-4AD6N 14.9
GTEX-12WSN-1326-SM-5GCNT 12.8
GTEX-11EQ9-1826-SM-5Q5AJ 10.0
GTEX-ZYW4-0826-SM-5GIDG 7.9
GTEX-11ONC-2126-SM-5HL6E 6.9
GTEX-11GSO-1926-SM-5A5K3 6.2
GTEX-ZV6S-1826-SM-5NQ8D 6.1
GTEX-XV7Q-2326-SM-4BRVZ 5.5
GTEX-12BJ1-1826-SM-5HL9N 5.3
GTEX-XQ3S-1326-SM-4BOPQ 5.3
GTEX-11ZUS-0826-SM-5FQUY 4.2
GTEX-ZA64-1526-SM-5CVMD 4.2
GTEX-11O72-2126-SM-5N9FO 4.1
GTEX-Y5V6-2126-SM-4WWFX 4.1
GTEX-ZYFC-0826-SM-5E44K 3.9
GTEX-ZAB4-2526-SM-5HL8M 3.8
GTEX-11DXZ-1926-SM-5GZZL 3.4
GTEX-ZUA1-1526-SM-59HLS 3.4
GTEX-S7SE-0826-SM-4AT4D 3.2
GTEX-132NY-0826-SM-5K7Y7 3.1
GTEX-13FTW-1426-SM-5LZWZ 3.0
GTEX-Y8E4-1626-SM-5S2MW 2.9
GTEX-117XS-1926-SM-5GICO 2.8
GTEX-117YX-1426-SM-5H12H 2.8
GTEX-11WQK-2426-SM-5GU5C 2.8
GTEX-12WSB-0626-SM-59HJO 2.6
GTEX-S32W-2026-SM-4AD6E 2.6
GTEX-XGQ4-0926-SM-4AT4U 2.6
GTEX-Y9LG-1426-SM-5IFJZ 2.6
GTEX-11NV4-2026-SM-5N9DG 2.5
GTEX-11OF3-1926-SM-59889 2.5
GTEX-13O61-1826-SM-5KM4I 2.5
GTEX-12KS4-0126-SM-5Q5A5 2.4
GTEX-145MN-1926-SM-5SIAI 2.4
GTEX-XQ8I-2426-SM-4WAXY 2.4
GTEX-ZQG8-0726-SM-5P9H9 2.3
GTEX-ZWKS-2826-SM-5NQ74 2.3
GTEX-13N1W-0626-SM-5MR4U 2.2
GTEX-TKQ2-1826-SM-33HB2 2.2
GTEX-XMK1-1126-SM-4IHJ8 2.2
GTEX-11DXY-2326-SM-5GICW 2.1
GTEX-YJ8O-2226-SM-5IFHW 2.1
GTEX-13W46-0826-SM-5LU3H 2.0
GTEX-144GM-0926-SM-5O994 2.0
GTEX-QMRM-1626-SM-4R1KV 2.0
GTEX-WFON-1826-SM-3GILG 2.0
GTEX-YFCO-1826-SM-4W1YH 2.0
GTEX-12WSM-1726-SM-5BC6J 1.9
GTEX-132AR-0826-SM-5EGK6 1.9
GTEX-144GL-2026-SM-5LU3O 1.9
GTEX-14753-2426-SM-5LU8U 1.8
GTEX-ZYT6-0126-SM-5E45J 1.8
GTEX-ZT9W-2026-SM-51MRA 1.7
GTEX-145ME-1526-SM-5Q5F2 1.6
GTEX-YB5E-1726-SM-5IFJ3 1.6
GTEX-ZDTT-2126-SM-5S2OJ 1.6
GTEX-ZQUD-1926-SM-51MSA 1.6
GTEX-PSDG-1626-SM-48TCQ 1.5
GTEX-YEC3-1026-SM-5IFI5 1.5
GTEX-13FTX-1126-SM-5N9EN 1.4
GTEX-13O3Q-2226-SM-5KM4O 1.4
GTEX-13S86-1226-SM-5S2OA 1.4
GTEX-REY6-2426-SM-48FF5 1.4
GTEX-S4Q7-1126-SM-4AD6R 1.4
GTEX-11TUW-1826-SM-5BC5D 1.3
GTEX-11ZTT-2326-SM-5EQLG 1.3
GTEX-13CF3-2126-SM-5IFJP 1.3
GTEX-TKQ1-0226-SM-33HB5 1.3
GTEX-11P82-1326-SM-5HL62 1.2
GTEX-13PVQ-1026-SM-5KM3M 1.2
GTEX-14E6E-1326-SM-5S2NR 1.2
GTEX-WY7C-2726-SM-3NB3P 1.2
GTEX-ZZ64-1226-SM-5E43R 1.2
GTEX-11DZ1-0326-SM-5N9BN 1.1
GTEX-139T6-1626-SM-5PNYZ 1.1
GTEX-X4XY-0926-SM-4E3JD 1.1
GTEX-R55D-0826-SM-48FEA 1.0
GTEX-ZLFU-2126-SM-4WWEV 1.0
GTEX-RUSQ-2026-SM-4GIAK 0.9
GTEX-U8XE-0826-SM-4E3J1 0.9
GTEX-ZDXO-0126-SM-5S2ND 0.9
GTEX-ZDYS-1126-SM-5K7UB 0.9
GTEX-UTHO-1026-SM-3GAF7 0.6
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

51.1

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 51.1
FF:10080-102A8 77 years, female 51.1

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