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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:300.2TPM
GTEx:109.8RPKM
FANTOM5:407.8Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA011101

 

Antibody CAB018969

 

Glandular cells

Medium   High  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

300.2

overview Male, age 65
Sample 1
TPM: 268.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 316.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 318.8
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 296.7

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

109.8

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 109.8
Samples: 88

Max RPKM: 271.8
Min RPKM: 5
Std RPKM: 64.1
Median RPKM: 103.7
GTEX-111YS-1426-SM-5GID8 271.8
GTEX-ZLV1-1126-SM-4WWBW 222.8
GTEX-1122O-1326-SM-5H11F 221.7
GTEX-13D11-0726-SM-5LZZB 210.5
GTEX-YB5E-1526-SM-5IFIE 203.9
GTEX-YEC4-1726-SM-4W21E 201.5
GTEX-14DAR-1426-SM-5RQIR 199.9
GTEX-145LT-1026-SM-5LU9O 198.1
GTEX-ZPCL-1726-SM-57WEO 192.9
GTEX-ZA64-1226-SM-5HL7B 192.8
GTEX-13FTW-2026-SM-5IJE2 189.7
GTEX-ZTX8-0526-SM-59HLD 185.7
GTEX-ZVZP-1826-SM-5GZXB 181.7
GTEX-ZTSS-0926-SM-59865 180.6
GTEX-11DXX-1626-SM-5H11H 178.4
GTEX-13PL7-2626-SM-5IFH4 177.7
GTEX-ZXES-1526-SM-5NQ95 177.6
GTEX-1399S-2026-SM-5KM4B 176.3
GTEX-ZYFG-2026-SM-5E43Y 175.5
GTEX-11I78-1126-SM-5A5K5 170.7
GTEX-XUZC-1426-SM-4BRV3 170.1
GTEX-ZZ64-0526-SM-5GZXM 168.0
GTEX-11EQ9-1326-SM-5985X 167.6
GTEX-Y9LG-1626-SM-5IFHM 165.7
GTEX-XGQ4-1326-SM-4GIDU 165.6
GTEX-YF7O-1826-SM-5IFIU 162.1
GTEX-133LE-1426-SM-5IFH1 156.6
GTEX-ZYWO-1526-SM-5SIAL 149.9
GTEX-14E6E-1626-SM-5RQI7 144.7
GTEX-131XF-1326-SM-5GCMQ 138.9
GTEX-11P7K-1626-SM-5GU63 138.5
GTEX-139YR-2226-SM-5IFFW 136.3
GTEX-11DXZ-1326-SM-5H11X 128.0
GTEX-X5EB-1626-SM-4E3IV 126.1
GTEX-XXEK-1026-SM-4BRUW 122.4
GTEX-13113-1226-SM-5EGHT 120.7
GTEX-139T6-1026-SM-5IJGC 120.6
GTEX-XBED-1426-SM-4AT4G 118.6
GTEX-1399R-2026-SM-5K7WN 114.3
GTEX-ZTPG-2626-SM-57WFX 113.9
GTEX-ZVP2-1726-SM-5GU5P 111.2
GTEX-ZVT2-2126-SM-5NQ93 108.4
GTEX-ZLFU-1526-SM-4WWBT 106.0
GTEX-XAJ8-0526-SM-47JYK 104.3
GTEX-13CF3-1226-SM-5LZXN 103.1
GTEX-WQUQ-2426-SM-4MVNW 102.9
GTEX-ZEX8-1826-SM-57WBH 102.9
GTEX-WFJO-0926-SM-4LVM2 102.3
GTEX-11P82-0826-SM-5P9GU 101.9
GTEX-13FH7-1226-SM-5IJFK 96.9
GTEX-13RTK-0826-SM-5Q5C6 93.9
GTEX-11NSD-1726-SM-5N9C3 92.7
GTEX-11XUK-1426-SM-5EQMG 89.9
GTEX-WH7G-1626-SM-4LVMY 88.4
GTEX-Y114-1426-SM-4TT6W 88.3
GTEX-12BJ1-1926-SM-5HL9Z 87.4
GTEX-VJYA-0926-SM-4KL1N 84.3
GTEX-Y5LM-1626-SM-4VDTB 84.2
GTEX-13O61-1326-SM-5KM31 83.0
GTEX-WFG8-1626-SM-4LVMB 80.4
GTEX-ZPIC-2326-SM-57WDW 78.0
GTEX-1399U-2126-SM-5IFEZ 77.8
GTEX-WRHK-1026-SM-4MVOD 76.9
GTEX-WFG7-1726-SM-4LVME 73.6
GTEX-Z9EW-0926-SM-5CVMM 72.1
GTEX-131XG-1726-SM-5LZUR 67.8
GTEX-ZP4G-1626-SM-57WGD 66.7
GTEX-11VI4-1626-SM-5EQKO 55.6
GTEX-X15G-1426-SM-4PQZK 52.8
GTEX-Y3IK-1726-SM-4YCCR 51.7
GTEX-13O21-1026-SM-5IJDU 47.6
GTEX-13QBU-1926-SM-5IJEW 37.3
GTEX-ZQG8-2526-SM-57WEQ 33.5
GTEX-145ME-0926-SM-5O9AR 32.1
GTEX-VUSG-1726-SM-4KKZL 30.5
GTEX-12WSK-1526-SM-5CVNO 25.5
GTEX-148VJ-2226-SM-5NQ9M 17.4
GTEX-13OVI-1926-SM-5IJCG 17.3
GTEX-UPK5-2026-SM-4JBIM 15.8
GTEX-WEY5-1526-SM-4LMJF 12.7
GTEX-ZC5H-2326-SM-4WAYT 12.4
GTEX-ZF2S-1726-SM-57WFT 10.5
GTEX-13111-1426-SM-5DUW3 10.0
GTEX-111CU-1326-SM-5NQ8L 9.8
GTEX-ZQUD-0926-SM-57WE3 8.1
GTEX-117YX-0326-SM-5GICL 6.1
GTEX-1192X-2526-SM-59868 5.3
GTEX-XMK1-1826-SM-4B66F 5.0
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

407.8

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 407.8
FF:10024-101D6 15,40,85 years, mixed 407.8

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The Human Protein Atlas project is funded
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