Tissue expression of ATXN2L - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

Protein expression

RNA expression

HPA:	55.4	TPM
GTEx:	28.9	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Not detected
Glial cells:	Not detected
Neuronal cells:	Not detected
Neuropil:	Not detected

Antibody staining	Antibody HPA041506	Antibody HPA043391
Endothelial cells	Low	Not detected
Glial cells	Low	Not detected
Neuronal cells	Medium	Not detected
Neuropil	Low	Not detected

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	55.4

Male, age 5

Sample 1
TPM: 41.5

Female, age 40

Sample 2
TPM: 72.5

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 52.4

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	28.9

GTEx sample id

RPKM

Brain - Cortex

Brain - Cortex
RPKM: 34.7

Samples: 114

Max RPKM: 89.2
Min RPKM: 17
Std RPKM: 8.8
Median RPKM: 34

GTEX-11OF3-2926-SM-5HL78

89.2

GTEX-13FXS-3126-SM-5J2NN

54.8

GTEX-13NYS-3126-SM-5KLYV

54.8

GTEX-145LS-3126-SM-5Q5BY

53.0

GTEX-X585-3026-SM-46MWF

52.6

GTEX-1192X-3126-SM-5N9BY

52.3

GTEX-12ZZY-3026-SM-5GCOU

48.6

GTEX-ZAJG-3126-SM-5HL9J

47.7

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Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 22.8

Samples: 108

Max RPKM: 39
Min RPKM: 7.2
Std RPKM: 6.5
Median RPKM: 22.5

GTEX-X585-0011-R10A-SM-46MUY

39.0

GTEX-13NYS-0011-R10a-SM-5MR4S

38.4

GTEX-X4EP-0011-R10B-SM-4QASJ

37.8

GTEX-145LS-0011-R10a-SM-5PNUQ

37.6

GTEX-NL3H-0011-R10A-SM-2I3E9

33.9

GTEX-NPJ8-0011-R10A-SM-2YUMO

33.9

GTEX-13CZV-0011-R10b-SM-5LZYD

32.8

GTEX-13N1W-0011-R10b-SM-5MR4H

32.7

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CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue