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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:8.7TPM
GTEx:36.9RPKM
FANTOM5:29.3Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Not detected
 

Antibody staining

Antibody HPA002188

 

Antibody CAB024961

 

Glandular cells

Low   Not detected  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

8.7

overview Male, age 65
Sample 1
TPM: 3.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 6.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 16.2
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 9.5

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

36.9

GTEx sample id

RPKM

8.014.625.72.749.2050100150200250300350400450500550
 
8.014.625.72.749.2050100150200250300350400450500550

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 36.9
Samples: 88

Max RPKM: 588.1
Min RPKM: 2.7
Std RPKM: 73
Median RPKM: 14.6
GTEX-13OVI-1926-SM-5IJCG 588.1
GTEX-12WSK-1526-SM-5CVNO 211.5
GTEX-1192X-2526-SM-59868 206.7
GTEX-Y5LM-1626-SM-4VDTB 160.1
GTEX-111CU-1326-SM-5NQ8L 140.9
GTEX-WFG8-1626-SM-4LVMB 128.2
GTEX-ZLV1-1126-SM-4WWBW 124.3
GTEX-XMK1-1826-SM-4B66F 121.3
GTEX-ZVT2-2126-SM-5NQ93 119.8
GTEX-13QBU-1926-SM-5IJEW 94.3
GTEX-XXEK-1026-SM-4BRUW 76.7
GTEX-ZPIC-2326-SM-57WDW 65.0
GTEX-148VJ-2226-SM-5NQ9M 59.7
GTEX-Y3IK-1726-SM-4YCCR 56.0
GTEX-117YX-0326-SM-5GICL 49.2
GTEX-WFG7-1726-SM-4LVME 47.5
GTEX-ZTPG-2626-SM-57WFX 41.5
GTEX-ZQG8-2526-SM-57WEQ 40.5
GTEX-ZP4G-1626-SM-57WGD 37.9
GTEX-ZQUD-0926-SM-57WE3 32.8
GTEX-13111-1426-SM-5DUW3 31.1
GTEX-ZTSS-0926-SM-59865 29.9
GTEX-WH7G-1626-SM-4LVMY 24.3
GTEX-13RTK-0826-SM-5Q5C6 23.8
GTEX-145ME-0926-SM-5O9AR 23.7
GTEX-13O21-1026-SM-5IJDU 23.5
GTEX-139T6-1026-SM-5IJGC 22.4
GTEX-XBED-1426-SM-4AT4G 21.0
GTEX-11I78-1126-SM-5A5K5 20.7
GTEX-11XUK-1426-SM-5EQMG 20.6
GTEX-ZF2S-1726-SM-57WFT 19.9
GTEX-139YR-2226-SM-5IFFW 19.5
GTEX-11DXZ-1326-SM-5H11X 19.2
GTEX-YEC4-1726-SM-4W21E 17.7
GTEX-Z9EW-0926-SM-5CVMM 17.4
GTEX-VUSG-1726-SM-4KKZL 17.3
GTEX-13O61-1326-SM-5KM31 17.1
GTEX-Y9LG-1626-SM-5IFHM 16.7
GTEX-11EQ9-1326-SM-5985X 16.6
GTEX-XUZC-1426-SM-4BRV3 16.1
GTEX-ZC5H-2326-SM-4WAYT 16.0
GTEX-Y114-1426-SM-4TT6W 15.9
GTEX-13113-1226-SM-5EGHT 15.2
GTEX-11VI4-1626-SM-5EQKO 14.8
GTEX-ZPCL-1726-SM-57WEO 14.4
GTEX-WRHK-1026-SM-4MVOD 14.2
GTEX-YB5E-1526-SM-5IFIE 14.2
GTEX-1399U-2126-SM-5IFEZ 13.9
GTEX-ZYWO-1526-SM-5SIAL 13.7
GTEX-ZYFG-2026-SM-5E43Y 12.9
GTEX-ZVZP-1826-SM-5GZXB 11.7
GTEX-ZZ64-0526-SM-5GZXM 11.5
GTEX-XGQ4-1326-SM-4GIDU 10.9
GTEX-YF7O-1826-SM-5IFIU 10.5
GTEX-X15G-1426-SM-4PQZK 10.5
GTEX-XAJ8-0526-SM-47JYK 10.1
GTEX-WQUQ-2426-SM-4MVNW 9.7
GTEX-ZLFU-1526-SM-4WWBT 9.3
GTEX-13PL7-2626-SM-5IFH4 9.3
GTEX-131XG-1726-SM-5LZUR 9.0
GTEX-12BJ1-1926-SM-5HL9Z 8.6
GTEX-11P7K-1626-SM-5GU63 8.5
GTEX-ZXES-1526-SM-5NQ95 8.4
GTEX-WEY5-1526-SM-4LMJF 8.3
GTEX-131XF-1326-SM-5GCMQ 8.1
GTEX-UPK5-2026-SM-4JBIM 8.0
GTEX-13FH7-1226-SM-5IJFK 7.9
GTEX-145LT-1026-SM-5LU9O 7.8
GTEX-WFJO-0926-SM-4LVM2 7.6
GTEX-11P82-0826-SM-5P9GU 7.5
GTEX-ZTX8-0526-SM-59HLD 7.5
GTEX-ZEX8-1826-SM-57WBH 7.0
GTEX-13CF3-1226-SM-5LZXN 6.8
GTEX-ZA64-1226-SM-5HL7B 6.7
GTEX-1399R-2026-SM-5K7WN 6.6
GTEX-1122O-1326-SM-5H11F 6.6
GTEX-VJYA-0926-SM-4KL1N 6.5
GTEX-11DXX-1626-SM-5H11H 6.4
GTEX-X5EB-1626-SM-4E3IV 6.3
GTEX-14E6E-1626-SM-5RQI7 5.7
GTEX-11NSD-1726-SM-5N9C3 5.6
GTEX-14DAR-1426-SM-5RQIR 5.2
GTEX-133LE-1426-SM-5IFH1 5.0
GTEX-ZVP2-1726-SM-5GU5P 4.7
GTEX-1399S-2026-SM-5KM4B 4.0
GTEX-111YS-1426-SM-5GID8 3.8
GTEX-13D11-0726-SM-5LZZB 3.7
GTEX-13FTW-2026-SM-5IJE2 2.7
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

29.3

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 29.3
FF:10024-101D6 15,40,85 years, mixed 29.3

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The Human Protein Atlas project is funded
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