Cell atlas - OTP - The Human Protein Atlas

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OTP

TISSUE

CELL

CANCER

CELL ATLAS RNA EXPRESSION

GENE/PROTEIN

Dictionary

Human cell

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GENERAL INFORMATION
Gene name	OTP
Gene description	Orthopedia homeobox
Protein class	Predicted intracellular proteins Transcription factors
Predicted localization	Intracellular
Number of transcripts	1
	SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION
Summary
RNA cell category	Not detected
Protein evidence	Evidence at protein level
Main location	Not available

DATA RELIABILITY
Reliability score	Pending cell analysis.

ASSAYS

RNA EXPRESSION OVERVIEW
RNA cell line category: Not detected Organ Origin Category Expression Alphabetical Cell lines sorted after organ of phenotypic resemblance. Cell lines sorted after biological source for establishment. Cell lines sorted after the cell line category according to Cellosaurus. Cell lines sorted on descending RNA expression. Cell lines sorted alphabetically.

GENE INFORMATION
Gene name	OTP
Synonyms
Description	Orthopedia homeobox (HGNC Symbol)
Entrez gene summary	This gene encodes a member of the homeodomain (HD) family. HD family proteins are helix-turn-helix transcription factors that play key roles in the specification of cell fates. This protein may function during brain development. [provided by RefSeq, Jul 2008]
Chromosome	5
Cytoband	q14.1
Chromosome location (bp)	77628712 - 77639688
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000171540 (version 83.38)
Entrez gene	23440
UniProt	Q5XKR4 (UniProt - Evidence at protein level)
neXtProt	NX_Q5XKR4
Antibodypedia	OTP antibodies

PROTEIN BROWSER

OTP-001

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
OTP-001 ENSP00000302814 ENST00000306422	Q5XKR4 [Direct mapping] Homeobox protein orthopedia Show all	Predicted intracellular proteins Transcription factors Helix-turn-helix domains Show all	GO:0002052 [positive regulation of neuroblast proliferation] GO:0003677 [DNA binding] GO:0005634 [nucleus] GO:0006351 [transcription, DNA-templated] GO:0006355 [regulation of transcription, DNA-templated] GO:0021879 [forebrain neuron differentiation] GO:0021979 [hypothalamus cell differentiation] GO:0021985 [neurohypophysis development] GO:0043565 [sequence-specific DNA binding] Show all	325 aa 34.2 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.