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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:23.0RPKM
FANTOM5:230.9Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA034631

 

Antibody CAB033265

 

Antibody CAB037325

 

Glial cells

Medium   Not detected   Not detected  

Neuronal cells

Not detected   Medium   Not detected  
     
     
     

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

23.0

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 23.0
Samples: 117

Max RPKM: 58
Min RPKM: 4.4
Std RPKM: 11
Median RPKM: 23.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 58.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 47.7
GTEX-11OF3-0011-R5a-SM-57WB4 45.0
GTEX-13G51-0011-R5a-SM-5L3EB 44.9
GTEX-145MH-0011-R5a-SM-5P9JT 42.8
GTEX-WHSE-0011-R5A-SM-3P5ZO 42.5
GTEX-T5JC-0011-R5A-SM-32PLK 40.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 39.5
GTEX-QVJO-0011-R5A-SM-2S1QM 39.0
GTEX-131YS-0011-R5b-SM-5K7YB 38.8
GTEX-1313W-0011-R5b-SM-5L3EP 38.0
GTEX-139TT-0011-R5b-SM-5K7W8 37.8
GTEX-12WSC-0011-R5b-SM-5CVNS 37.3
GTEX-13SLX-0011-R5a-SM-5O9BV 37.0
GTEX-1399T-0011-R5b-SM-5IJDK 36.6
GTEX-S7SE-0011-R5A-SM-2XCDA 35.8
GTEX-ZUA1-0011-R5b-SM-51MTG 35.6
GTEX-T6MN-0011-R5A-SM-32QPD 35.0
GTEX-145LS-0011-R5a-SM-5SI65 34.9
GTEX-RU72-0011-R5A-SM-2TF6U 34.6
GTEX-13X6J-0011-R5b-SM-5PNWT 34.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 33.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 33.1
GTEX-R55E-0011-R5A-SM-2TC5N 32.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 32.1
GTEX-13VXU-0011-R5a-SM-5O9D7 32.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 31.9
GTEX-14ABY-0011-R5b-SM-5SI7B 31.4
GTEX-13X6K-0011-R5b-SM-5PNUE 31.1
GTEX-WL46-0011-R5A-SM-3LK6V 31.1
GTEX-13OVL-0011-R5b-SM-5L3FU 30.7
GTEX-13JUV-0011-R5a-SM-5LZY5 30.1
GTEX-N7MS-0011-R5a-SM-2HMK8 29.2
GTEX-Z93S-0011-R5b-SM-4RGNI 28.7
GTEX-13FXS-0011-R5b-SM-5LZYE 28.6
GTEX-WVLH-0011-R5A-SM-3MJFW 28.3
GTEX-14BIM-0011-R5b-SM-5S2RM 28.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 27.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 27.8
GTEX-N7MT-0011-R5a-SM-2I3G6 27.8
GTEX-P44H-0011-R5A-SM-2XCEX 27.3
GTEX-WZTO-0011-R5B-SM-3NMC5 27.2
GTEX-13OW5-0011-R5b-SM-5L3FR 26.7
GTEX-11GSP-0011-R5a-SM-57WBE 26.4
GTEX-13OW6-0011-R5a-SM-5O9BK 26.3
GTEX-13O3O-0011-R5b-SM-5KM44 26.1
GTEX-13S7M-0011-R5b-SM-5P9HS 26.0
GTEX-WWYW-0011-R5A-SM-3NB3E 26.0
GTEX-13FLW-0011-R5a-SM-5LZX6 25.6
GTEX-12WSF-0011-R5a-SM-5HL8K 24.8
GTEX-UTHO-0011-R5A-SM-3GIJD 24.7
GTEX-11NV4-0011-R5a-SM-5NQ88 24.6
GTEX-13OW7-0011-R5b-SM-5O9DM 24.3
GTEX-T2IS-0011-R5A-SM-32QP4 24.1
GTEX-TSE9-0011-R5A-SM-3DB7J 24.0
GTEX-NL4W-0011-R5a-SM-2I3GD 23.7
GTEX-13NYB-0011-R5a-SM-5MR45 23.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 23.3
GTEX-11H98-0011-R5b-SM-57WCF 23.2
GTEX-13OVH-0011-R5b-SM-5KM4L 22.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 22.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 21.8
GTEX-13CZV-0011-R5a-SM-5K7XA 21.5
GTEX-ZE7O-0011-R5a-SM-57WBO 21.5
GTEX-12WSD-0011-R5b-SM-5CVNG 21.4
GTEX-OHPN-0011-R5A-SM-2I5FF 20.9
GTEX-RVPU-0011-R5A-SM-2XCAD 20.9
GTEX-X585-0011-R5A-SM-46MVI 20.8
GTEX-144GO-0011-R5a-SM-5PNUR 20.0
GTEX-RVPV-0011-R5A-SM-2TF69 19.8
GTEX-13NYS-0011-R5a-SM-5MR4D 18.2
GTEX-13X6I-0011-R5a-SM-5PNWW 18.0
GTEX-14BIN-0011-R5b-SM-5SI78 17.9
GTEX-12ZZX-0011-R5a-SM-5HL89 17.5
GTEX-13FLV-0011-R5a-SM-5LZWT 17.5
GTEX-PVOW-0011-R5A-SM-32PL7 17.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 17.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 17.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 17.2
GTEX-ZXG5-0011-R5b-SM-57WBN 17.2
GTEX-YFC4-0011-R5a-SM-4RGLR 16.7
GTEX-132Q8-0011-R5a-SM-5IJDM 16.5
GTEX-13CIG-0011-R5b-SM-5L3F2 16.3
GTEX-YJ89-0011-R5a-SM-4V6GM 16.1
GTEX-12WSB-0011-R5b-SM-5GU67 15.8
GTEX-OXRN-0011-R5A-SM-2I5EF 14.9
GTEX-XOTO-0011-R5A-SM-4B657 14.7
GTEX-12WSH-0011-R5b-SM-5P9F3 14.3
GTEX-XMD1-0011-R5A-SM-4AT47 13.9
GTEX-13JVG-0011-R5a-SM-5MR4O 13.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 13.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 13.2
GTEX-NL3H-0011-R5a-SM-2I3GB 13.0
GTEX-X4XX-0011-R5A-SM-46MWN 12.5
GTEX-11WQC-0011-R5a-SM-5BC74 12.0
GTEX-144GL-0011-R5b-SM-5PNUJ 11.7
GTEX-13112-0011-R5b-SM-5DUV8 11.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 10.4
GTEX-ZV68-0011-R5a-SM-4YCDW 9.9
GTEX-13FHP-0011-R5b-SM-5LZY2 9.5
GTEX-ZVT3-0011-R5a-SM-51MSI 9.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 9.1
GTEX-X261-0011-R5A-SM-3NMB4 8.9
GTEX-QMR6-0011-R5A-SM-32PKT 8.8
GTEX-12WSA-0011-R5b-SM-5GU5I 8.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 8.3
GTEX-139TS-0011-R5b-SM-5J2MZ 8.2
GTEX-1477Z-0011-R5b-SM-5PNUO 8.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 8.1
GTEX-NPJ7-0011-R5a-SM-33HBK 7.1
GTEX-1445S-0011-R5a-SM-5PNUS 6.7
GTEX-S7PM-0011-R5A-SM-3NM8G 6.4
GTEX-13CF2-0011-R5a-SM-5LZWS 6.2
GTEX-145MG-0011-R5b-SM-5S2VU 6.0
GTEX-11UD1-0011-R5b-SM-5P9FP 5.7
GTEX-139T8-0011-R5b-SM-5J1MO 4.4
GTEX-13NZA-0011-R5b-SM-5KM4K 4.4
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

230.9

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 230.9
FF:10379-105H1 89 years, female 248.3
FF:10164-103B2 76 years, female 213.5

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The Human Protein Atlas project is funded
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