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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:77.6TPM
GTEx:44.5RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Not detected
Neuropil:Medium
 

Antibody staining

Antibody HPA034631

 

Antibody CAB033265

 

Antibody CAB037325

 

Endothelial cells

Medium   Not detected   Not detected  

Glial cells

Medium   Not detected   Not detected  

Neuronal cells

Not detected   Low   Not detected  

Neuropil

Medium   Medium   Medium  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

77.6

N/A Male, age 5
Sample 1
TPM: 82.9
overview Female, age 40
Sample 2
TPM: 41.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 108.7
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

44.5

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 47.6
Samples: 114

Max RPKM: 91.3
Min RPKM: 4.8
Std RPKM: 17.7
Median RPKM: 48
GTEX-Z93S-2926-SM-57WB9 91.3
GTEX-Y111-2726-SM-4TT3N 84.9
GTEX-X4XX-3026-SM-3NMB2 78.5
GTEX-12126-1026-SM-5P9JJ 77.2
GTEX-T5JC-2426-SM-3NMDB 76.7
GTEX-11ZUS-2926-SM-5FQSL 76.4
GTEX-WL46-2926-SM-3LK82 75.5
GTEX-Q2AG-2926-SM-2HMJ3 74.8
GTEX-11NV4-2126-SM-5N9DS 73.8
GTEX-RNOR-2326-SM-2TF4I 73.8
GTEX-WHSE-3026-SM-3P5ZH 71.7
GTEX-12WSC-3026-SM-5GCNF 70.6
GTEX-13O3Q-2926-SM-5KM45 70.5
GTEX-12ZZX-2926-SM-5GCOQ 70.1
GTEX-T2IS-3026-SM-32QPM 69.9
GTEX-145MH-3026-SM-5Q5DZ 68.4
GTEX-ZUA1-3026-SM-59HJC 67.5
GTEX-YJ89-3026-SM-5IFJI 66.6
GTEX-WWYW-3126-SM-3NB39 66.5
GTEX-13SLX-3126-SM-5S2Q5 65.1
GTEX-QVJO-1426-SM-2S1QY 64.3
GTEX-144GL-3026-SM-5Q5CW 63.2
GTEX-WVLH-3026-SM-3MJG9 62.6
GTEX-WZTO-2926-SM-3NM9I 61.7
GTEX-117XS-3026-SM-5N9CA 61.3
GTEX-131YS-3126-SM-5KLYT 61.2
GTEX-1313W-3126-SM-5LZUI 60.9
GTEX-145MG-3026-SM-5RQJA 60.7
GTEX-T6MN-2626-SM-32PMQ 59.1
GTEX-R55F-1326-SM-5S2V4 58.9
GTEX-ZYFD-3026-SM-5E44C 58.4
GTEX-11PRG-2926-SM-5987A 58.1
GTEX-14ASI-3026-SM-5S2PN 57.7
GTEX-14BMV-3026-SM-5S2PQ 56.9
GTEX-PVOW-2526-SM-2XCF7 56.9
GTEX-1128S-2726-SM-5H12C 56.6
GTEX-13OW6-3026-SM-5J2MI 56.6
GTEX-ZE7O-3126-SM-5HL5X 56.0
GTEX-XOTO-3026-SM-4B65M 55.3
GTEX-13OVH-3026-SM-5MR4N 54.3
GTEX-13VXU-2926-SM-5LU5C 54.0
GTEX-13FXS-3126-SM-5J2NN 53.8
GTEX-11NUK-2926-SM-5A5MD 52.5
GTEX-131XW-3126-SM-5LZUC 51.9
GTEX-14A5I-2926-SM-5Q5CQ 51.5
GTEX-13FLW-1426-SM-5K7YE 51.2
GTEX-11GSO-2926-SM-5HL73 50.6
GTEX-13JUV-2926-SM-5LZX7 50.5
GTEX-11DXW-1126-SM-5H12Q 49.9
GTEX-145MF-2726-SM-5O995 49.5
GTEX-13NYC-2826-SM-5K7WR 49.4
GTEX-12ZZY-3026-SM-5GCOU 49.2
GTEX-12WSH-3026-SM-5CVNI 49.0
GTEX-YFC4-3126-SM-5PNV6 49.0
GTEX-13QIC-2926-SM-5J2NF 48.4
GTEX-147GR-3026-SM-5S2ML 48.1
GTEX-TSE9-3026-SM-3DB76 48.0
GTEX-Y8DK-0826-SM-4TT3T 48.0
GTEX-1192X-3126-SM-5N9BY 47.9
GTEX-13PL6-3126-SM-5LUAR 47.7
GTEX-11DXY-3226-SM-5GIDE 47.0
GTEX-13NYB-3026-SM-5IJD7 46.9
GTEX-13X6J-3026-SM-5Q5CU 46.9
GTEX-11EI6-3026-SM-5GZZO 46.8
GTEX-X585-3026-SM-46MWF 46.5
GTEX-145LS-3126-SM-5Q5BY 46.2
GTEX-ZAK1-3026-SM-5S2MJ 46.2
GTEX-OXRN-2426-SM-2I5EQ 46.1
GTEX-1399T-3026-SM-5KLZC 45.6
GTEX-13X6K-2926-SM-5Q5D5 45.6
GTEX-ZVT3-3026-SM-5E43N 44.9
GTEX-11EMC-3226-SM-5EGKW 44.3
GTEX-111FC-3126-SM-5GZZ2 43.1
GTEX-RU72-3026-SM-5SI7Y 42.8
GTEX-ZAJG-3126-SM-5HL9J 42.6
GTEX-13FHP-3026-SM-5IJBS 42.3
GTEX-12ZZW-2926-SM-5LZUP 41.8
GTEX-NPJ8-1526-SM-2D7VU 41.7
GTEX-13O3O-3126-SM-5KM3H 40.8
GTEX-11OC5-0726-SM-5P9JK 40.1
GTEX-12ZZZ-3026-SM-5BC67 38.7
GTEX-11GS4-3126-SM-5A5LH 38.5
GTEX-11ONC-2926-SM-5P9JM 38.5
GTEX-132Q8-3026-SM-5PNVG 36.0
GTEX-NPJ7-2726-SM-2I3FT 35.0
GTEX-13JVG-3126-SM-5L3FH 34.2
GTEX-12WSD-3126-SM-5HL7P 33.9
GTEX-13S7M-3126-SM-5RQJQ 33.7
GTEX-XLM4-3026-SM-4AT6L 33.4
GTEX-13OW8-2826-SM-5L3GC 32.4
GTEX-QMR6-1426-SM-32PLA 32.4
GTEX-13NYS-3126-SM-5KLYV 31.3
GTEX-144FL-3026-SM-5O99C 31.2
GTEX-QDT8-2926-SM-32PKC 31.1
GTEX-ZZPT-3026-SM-5GZXH 30.6
GTEX-13FHO-3026-SM-5J1O9 30.3
GTEX-1117F-3226-SM-5N9CT 29.0
GTEX-11WQK-3026-SM-5EQL6 27.4
GTEX-UTHO-3026-SM-3GAFB 26.4
GTEX-13OW7-3026-SM-5L3GY 23.8
GTEX-13PVQ-3026-SM-5SI93 21.2
GTEX-13IVO-2926-SM-5L3CZ 20.8
GTEX-139T8-1026-SM-5J2MC 20.2
GTEX-QVUS-2826-SM-3GADB 20.2
GTEX-N7MT-1126-SM-5SI7V 18.3
GTEX-11GSP-3226-SM-5986O 18.2
GTEX-11O72-2926-SM-5BC4V 17.9
GTEX-11TTK-2926-SM-5PNYP 16.5
GTEX-13OVJ-2826-SM-5L3GW 16.4
GTEX-13G51-3026-SM-5IJB8 15.9
GTEX-1445S-3026-SM-5O9BR 15.9
GTEX-12WSA-2926-SM-5EQ4D 15.3
GTEX-PWO3-0926-SM-2I5EY 13.3
GTEX-11OF3-2926-SM-5HL78 4.8
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 41.2
Samples: 108

Max RPKM: 75.5
Min RPKM: 9.9
Std RPKM: 15.1
Median RPKM: 41.6
GTEX-Z93S-0011-R10a-SM-4RGNM 75.5
GTEX-13OW6-0011-R10a-SM-5L3HE 72.4
GTEX-YJ89-0011-R10a-SM-4SOK9 67.6
GTEX-12126-0011-R10b-SM-5BC6T 67.3
GTEX-N7MS-0011-R10A-SM-2HMJK 66.5
GTEX-Q2AG-0011-R10A-SM-2HMLA 66.5
GTEX-131XH-0011-R10a-SM-5EGLJ 65.7
GTEX-WL46-0011-R10A-SM-3MJFQ 62.9
GTEX-12WSC-0011-R10a-SM-5GU57 62.5
GTEX-13OW7-0011-R10a-SM-5L3H3 61.3
GTEX-1313W-0011-R10b-SM-5DUXA 60.0
GTEX-T5JC-0011-R10A-SM-32PM2 59.9
GTEX-11ZUS-0011-R10b-SM-5BC79 59.8
GTEX-145MG-0011-R10a-SM-5PNWG 58.7
GTEX-12WSE-0011-R10b-SM-5P9JV 58.5
GTEX-NL3H-0011-R10A-SM-2I3E9 58.5
GTEX-12ZZZ-0011-R10a-SM-5P9HC 58.3
GTEX-12ZZX-0011-R10b-SM-5DUWK 58.2
GTEX-X4XX-0011-R10B-SM-46MWO 57.0
GTEX-12WSM-0011-R10a-SM-5DUWV 56.3
GTEX-NL4W-0011-R10A-SM-2I3DY 55.8
GTEX-13OVL-0011-R10a-SM-5L3GS 54.5
GTEX-147GR-0011-R10b-SM-5S2UM 54.5
GTEX-14ASI-0011-R10b-SM-5S2VZ 54.5
GTEX-13FXS-0011-R10a-SM-5J2MA 54.2
GTEX-13O3Q-0011-R10b-SM-5KM39 54.0
GTEX-13N1W-0011-R10b-SM-5MR4H 53.9
GTEX-13SLX-0011-R10a-SM-5P9HV 53.5
GTEX-12WSH-0011-R10a-SM-5LZUS 52.0
GTEX-145MH-0011-R10b-SM-5PNUK 52.0
GTEX-11WQC-0011-R10a-SM-57WCT 51.5
GTEX-12ZZY-0011-R10b-SM-5HL7W 51.4
GTEX-131YS-0011-R10b-SM-5EQ5N 51.3
GTEX-TSE9-0011-R10A-SM-3DB7O 50.9
GTEX-WZTO-0011-R10B-SM-4E3KB 50.0
GTEX-ZVZQ-0011-R10b-SM-51MRT 49.3
GTEX-145LS-0011-R10a-SM-5PNUQ 48.0
GTEX-13X6J-0011-R10b-SM-5PNWA 47.8
GTEX-13S7M-0011-R10b-SM-5PNZB 47.2
GTEX-13JUV-0011-R10b-SM-5LZXR 47.0
GTEX-ZXG5-0011-R10a-SM-57WDD 46.6
GTEX-ZVT3-0011-R10b-SM-57WB6 46.3
GTEX-14BIN-0011-R10a-SM-5S2UA 46.2
GTEX-ZF28-0011-R10a-SM-4WWEH 44.9
GTEX-13QIC-0011-R10a-SM-5O9C7 44.7
GTEX-Y8DK-0011-R10A-SM-4SOK1 44.6
GTEX-13G51-0011-R10b-SM-5LZYF 44.4
GTEX-QVJO-0011-R10A-SM-2S1QJ 44.3
GTEX-X585-0011-R10A-SM-46MUY 43.7
GTEX-13FLV-0011-R10b-SM-5LZZ2 43.6
GTEX-12WSF-0011-R10a-SM-5LZVH 43.3
GTEX-T6MN-0011-R10A-SM-32QP7 42.9
GTEX-WVLH-0011-R10A-SM-3MJFM 42.3
GTEX-YFC4-0011-R10a-SM-4SOK5 41.9
GTEX-13FLW-0011-R10b-SM-5LZZF 41.3
GTEX-139TS-0011-R10a-SM-5K7TU 40.6
GTEX-147F4-0011-R10b-SM-5S2WC 40.6
GTEX-NPJ8-0011-R10A-SM-2YUMO 40.3
GTEX-13O3O-0011-R10a-SM-5LUA9 39.7
GTEX-11H98-0011-R10b-SM-5NQ98 39.0
GTEX-13NYS-0011-R10a-SM-5MR4S 38.2
GTEX-S7SE-0011-R10A-SM-2XCDF 38.1
GTEX-WWYW-0011-R10A-SM-3NB35 37.5
GTEX-13OW8-0011-R10a-SM-5L3H6 37.1
GTEX-13RTJ-0011-R10b-SM-5O9CW 36.0
GTEX-14BIL-0011-R10a-SM-5SI75 35.6
GTEX-13FTZ-0011-R10b-SM-5KLZS 35.5
GTEX-13X6K-0011-R10a-SM-5P9JR 35.5
GTEX-13FHO-0011-R10b-SM-5J2MM 35.1
GTEX-13QJC-0011-R10a-SM-5SI63 35.1
GTEX-OXRN-0011-R10A-SM-2I5GC 35.0
GTEX-13X6I-0011-R10a-SM-5PNWI 34.2
GTEX-ZDXO-0011-R10a-SM-4WWD8 34.2
GTEX-13CZV-0011-R10b-SM-5LZYD 34.1
GTEX-N7MT-0011-R10A-SM-2I3E1 33.3
GTEX-ZAB4-0011-R10a-SM-4SOKH 32.9
GTEX-NPJ7-0011-R10A-SM-2I3E5 32.6
GTEX-13NYB-0011-R10a-SM-5KM43 31.9
GTEX-13SLW-0011-R10a-SM-5S2UI 31.5
GTEX-ZUA1-0011-R10a-SM-51MT6 31.1
GTEX-132Q8-0011-R10b-SM-5DUWZ 30.6
GTEX-145LU-0011-R10a-SM-5PNWJ 30.6
GTEX-13NZA-0011-R10b-SM-5KM54 29.8
GTEX-P44H-0011-R10A-SM-2XCEK 28.9
GTEX-XLM4-0011-R10A-SM-4AT5P 28.4
GTEX-12ZZW-0011-R10b-SM-5HL9X 27.2
GTEX-1477Z-0011-R10b-SM-5S2RF 26.9
GTEX-11WQK-0011-R10a-SM-5BC6R 26.8
GTEX-14753-0011-R10b-SM-5S2WE 26.2
GTEX-QMR6-0011-R10A-SM-32PKO 26.1
GTEX-QDT8-0011-R10A-SM-32PKG 22.9
GTEX-X261-0011-R10B-SM-4E3JT 22.4
GTEX-X4EP-0011-R10B-SM-4QASJ 21.8
GTEX-ZV68-0011-R10a-SM-51MT7 21.2
GTEX-RVPU-0011-R10A-SM-2XCAH 20.4
GTEX-13N2G-0011-R10a-SM-5MR34 20.1
GTEX-11GSP-0011-R10a-SM-5NQ7J 19.9
GTEX-QVUS-0011-R10A-SM-3GIK3 19.5
GTEX-13IVO-0011-R10a-SM-5LZY3 19.2
GTEX-OXRO-0011-R10A-SM-2I5EH 19.2
GTEX-131XW-0011-R10a-SM-5DUVA 17.5
GTEX-13JVG-0011-R10b-SM-5KM2P 15.9
GTEX-1445S-0011-R10a-SM-5PNWB 15.6
GTEX-ZE7O-0011-R10a-SM-57WAZ 15.3
GTEX-12WSA-0011-R10b-SM-5P9ET 14.8
GTEX-12WSD-0011-R10b-SM-5GU79 14.7
GTEX-13OVJ-0011-R10b-SM-5L3HT 13.2
GTEX-XMD1-0011-R10A-SM-4AT4A 9.9
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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