We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
RPL38
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:735.9TPM
GTEx:134.5RPKM
FANTOM5:454.5Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA052543

 

Glandular cells

Medium  
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

735.9

overview Male, age 65
Sample 1
TPM: 804.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 744.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 707.3
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 687.7

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

134.5

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 134.5
Samples: 88

Max RPKM: 264.5
Min RPKM: 72.2
Std RPKM: 42.2
Median RPKM: 124.5
GTEX-148VJ-2226-SM-5NQ9M 264.5
GTEX-11VI4-1626-SM-5EQKO 247.3
GTEX-1399U-2126-SM-5IFEZ 221.3
GTEX-VUSG-1726-SM-4KKZL 217.4
GTEX-13O61-1326-SM-5KM31 205.7
GTEX-X15G-1426-SM-4PQZK 205.7
GTEX-Y5LM-1626-SM-4VDTB 203.2
GTEX-WRHK-1026-SM-4MVOD 202.2
GTEX-11NSD-1726-SM-5N9C3 199.0
GTEX-11P82-0826-SM-5P9GU 190.6
GTEX-11XUK-1426-SM-5EQMG 190.4
GTEX-1192X-2526-SM-59868 189.9
GTEX-13FH7-1226-SM-5IJFK 188.4
GTEX-ZC5H-2326-SM-4WAYT 185.6
GTEX-13QBU-1926-SM-5IJEW 182.4
GTEX-UPK5-2026-SM-4JBIM 180.2
GTEX-131XG-1726-SM-5LZUR 173.6
GTEX-12BJ1-1926-SM-5HL9Z 171.7
GTEX-ZEX8-1826-SM-57WBH 168.1
GTEX-ZLFU-1526-SM-4WWBT 166.1
GTEX-117YX-0326-SM-5GICL 164.2
GTEX-Y3IK-1726-SM-4YCCR 161.5
GTEX-145ME-0926-SM-5O9AR 161.0
GTEX-13111-1426-SM-5DUW3 156.7
GTEX-13113-1226-SM-5EGHT 154.5
GTEX-Z9EW-0926-SM-5CVMM 153.3
GTEX-13RTK-0826-SM-5Q5C6 153.1
GTEX-14E6E-1626-SM-5RQI7 153.0
GTEX-WH7G-1626-SM-4LVMY 152.6
GTEX-WEY5-1526-SM-4LMJF 152.3
GTEX-WFJO-0926-SM-4LVM2 147.8
GTEX-12WSK-1526-SM-5CVNO 141.1
GTEX-139T6-1026-SM-5IJGC 139.5
GTEX-ZYWO-1526-SM-5SIAL 139.3
GTEX-ZP4G-1626-SM-57WGD 138.4
GTEX-ZTPG-2626-SM-57WFX 136.1
GTEX-VJYA-0926-SM-4KL1N 135.0
GTEX-139YR-2226-SM-5IFFW 131.6
GTEX-XMK1-1826-SM-4B66F 130.3
GTEX-ZQUD-0926-SM-57WE3 129.9
GTEX-ZVP2-1726-SM-5GU5P 128.2
GTEX-ZXES-1526-SM-5NQ95 127.2
GTEX-ZF2S-1726-SM-57WFT 126.3
GTEX-13OVI-1926-SM-5IJCG 125.8
GTEX-ZQG8-2526-SM-57WEQ 123.3
GTEX-ZZ64-0526-SM-5GZXM 121.6
GTEX-ZPIC-2326-SM-57WDW 120.4
GTEX-1399S-2026-SM-5KM4B 120.1
GTEX-11I78-1126-SM-5A5K5 120.0
GTEX-131XF-1326-SM-5GCMQ 118.0
GTEX-XGQ4-1326-SM-4GIDU 117.0
GTEX-11DXZ-1326-SM-5H11X 116.7
GTEX-ZA64-1226-SM-5HL7B 116.4
GTEX-11EQ9-1326-SM-5985X 115.5
GTEX-11DXX-1626-SM-5H11H 114.8
GTEX-13O21-1026-SM-5IJDU 114.5
GTEX-ZVT2-2126-SM-5NQ93 114.5
GTEX-11P7K-1626-SM-5GU63 113.8
GTEX-ZYFG-2026-SM-5E43Y 113.3
GTEX-133LE-1426-SM-5IFH1 109.7
GTEX-1399R-2026-SM-5K7WN 108.8
GTEX-X5EB-1626-SM-4E3IV 108.2
GTEX-111CU-1326-SM-5NQ8L 107.2
GTEX-XBED-1426-SM-4AT4G 106.2
GTEX-YB5E-1526-SM-5IFIE 105.3
GTEX-WFG8-1626-SM-4LVMB 104.6
GTEX-Y114-1426-SM-4TT6W 103.7
GTEX-YEC4-1726-SM-4W21E 101.0
GTEX-13CF3-1226-SM-5LZXN 100.8
GTEX-WFG7-1726-SM-4LVME 99.4
GTEX-XAJ8-0526-SM-47JYK 98.0
GTEX-145LT-1026-SM-5LU9O 96.8
GTEX-ZTX8-0526-SM-59HLD 93.5
GTEX-XUZC-1426-SM-4BRV3 92.3
GTEX-XXEK-1026-SM-4BRUW 92.1
GTEX-13PL7-2626-SM-5IFH4 91.2
GTEX-14DAR-1426-SM-5RQIR 89.1
GTEX-13FTW-2026-SM-5IJE2 86.0
GTEX-Y9LG-1626-SM-5IFHM 85.9
GTEX-WQUQ-2426-SM-4MVNW 85.0
GTEX-ZLV1-1126-SM-4WWBW 83.3
GTEX-13D11-0726-SM-5LZZB 82.9
GTEX-ZVZP-1826-SM-5GZXB 77.7
GTEX-ZTSS-0926-SM-59865 76.6
GTEX-ZPCL-1726-SM-57WEO 76.5
GTEX-YF7O-1826-SM-5IFIU 75.3
GTEX-111YS-1426-SM-5GID8 72.6
GTEX-1122O-1326-SM-5H11F 72.2
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

454.5

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 454.5
FF:10024-101D6 15,40,85 years, mixed 454.5

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.