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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:42.6RPKM
FANTOM5:58.3Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA049830

 

Antibody CAB002015

 

Glial cells

Not detected   High  

Neuronal cells

Not detected   High  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

42.6

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 42.6
Samples: 117

Max RPKM: 72.4
Min RPKM: 13.6
Std RPKM: 12.3
Median RPKM: 44.2
GTEX-13NYB-0011-R5a-SM-5MR45 72.4
GTEX-139TT-0011-R5b-SM-5K7W8 70.2
GTEX-ZUA1-0011-R5b-SM-51MTG 68.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 66.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 64.0
GTEX-T6MN-0011-R5A-SM-32QPD 63.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60.6
GTEX-1399T-0011-R5b-SM-5IJDK 60.0
GTEX-T5JC-0011-R5A-SM-32PLK 60.0
GTEX-11OF3-0011-R5a-SM-57WB4 59.3
GTEX-11NV4-0011-R5a-SM-5NQ88 57.7
GTEX-13X6J-0011-R5b-SM-5PNWT 56.4
GTEX-R55E-0011-R5A-SM-2TC5N 56.1
GTEX-13FXS-0011-R5b-SM-5LZYE 55.9
GTEX-X585-0011-R5A-SM-46MVI 55.5
GTEX-TSE9-0011-R5A-SM-3DB7J 55.4
GTEX-13FLV-0011-R5a-SM-5LZWT 55.0
GTEX-13G51-0011-R5a-SM-5L3EB 54.9
GTEX-N7MS-0011-R5a-SM-2HMK8 54.8
GTEX-1313W-0011-R5b-SM-5L3EP 54.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 54.5
GTEX-13SLX-0011-R5a-SM-5O9BV 54.0
GTEX-Z93S-0011-R5b-SM-4RGNI 53.2
GTEX-13FLW-0011-R5a-SM-5LZX6 52.8
GTEX-13VXU-0011-R5a-SM-5O9D7 52.6
GTEX-12WSC-0011-R5b-SM-5CVNS 52.4
GTEX-WVLH-0011-R5A-SM-3MJFW 52.3
GTEX-13OVL-0011-R5b-SM-5L3FU 52.1
GTEX-WL46-0011-R5A-SM-3LK6V 51.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 50.2
GTEX-13JUV-0011-R5a-SM-5LZY5 49.9
GTEX-11H98-0011-R5b-SM-57WCF 49.8
GTEX-WHSE-0011-R5A-SM-3P5ZO 49.6
GTEX-XOTO-0011-R5A-SM-4B657 49.5
GTEX-14BIM-0011-R5b-SM-5S2RM 49.2
GTEX-13X6K-0011-R5b-SM-5PNUE 48.7
GTEX-145MH-0011-R5a-SM-5P9JT 48.7
GTEX-13CZV-0011-R5a-SM-5K7XA 47.7
GTEX-RU72-0011-R5A-SM-2TF6U 47.6
GTEX-13OVH-0011-R5b-SM-5KM4L 47.5
GTEX-131YS-0011-R5b-SM-5K7YB 47.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 47.0
GTEX-12ZZX-0011-R5a-SM-5HL89 46.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 45.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 45.8
GTEX-12WSA-0011-R5b-SM-5GU5I 45.6
GTEX-S7SE-0011-R5A-SM-2XCDA 45.6
GTEX-11GSP-0011-R5a-SM-57WBE 45.3
GTEX-14ABY-0011-R5b-SM-5SI7B 45.3
GTEX-13OW7-0011-R5b-SM-5O9DM 45.1
GTEX-QVJO-0011-R5A-SM-2S1QM 45.1
GTEX-WZTO-0011-R5B-SM-3NMC5 45.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 44.7
GTEX-13OW6-0011-R5a-SM-5O9BK 44.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 44.6
GTEX-13OW5-0011-R5b-SM-5L3FR 44.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 44.4
GTEX-13NYS-0011-R5a-SM-5MR4D 44.2
GTEX-OHPN-0011-R5A-SM-2I5FF 43.8
GTEX-WWYW-0011-R5A-SM-3NB3E 43.8
GTEX-12WSD-0011-R5b-SM-5CVNG 43.7
GTEX-P44H-0011-R5A-SM-2XCEX 43.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 43.5
GTEX-145LS-0011-R5a-SM-5SI65 43.2
GTEX-YFC4-0011-R5a-SM-4RGLR 43.2
GTEX-13O3O-0011-R5b-SM-5KM44 42.2
GTEX-NL4W-0011-R5a-SM-2I3GD 42.1
GTEX-13S7M-0011-R5b-SM-5P9HS 41.6
GTEX-132Q8-0011-R5a-SM-5IJDM 41.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 40.1
GTEX-139T8-0011-R5b-SM-5J1MO 39.9
GTEX-N7MT-0011-R5a-SM-2I3G6 39.4
GTEX-12WSF-0011-R5a-SM-5HL8K 38.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 38.2
GTEX-ZE7O-0011-R5a-SM-57WBO 38.0
GTEX-14BIN-0011-R5b-SM-5SI78 37.8
GTEX-NL3H-0011-R5a-SM-2I3GB 37.7
GTEX-RVPU-0011-R5A-SM-2XCAD 36.7
GTEX-RVPV-0011-R5A-SM-2TF69 36.3
GTEX-ZXG5-0011-R5b-SM-57WBN 36.3
GTEX-12WSB-0011-R5b-SM-5GU67 36.1
GTEX-13X6I-0011-R5a-SM-5PNWW 34.8
GTEX-13CIG-0011-R5b-SM-5L3F2 34.4
GTEX-UTHO-0011-R5A-SM-3GIJD 34.3
GTEX-13JVG-0011-R5a-SM-5MR4O 34.0
GTEX-YJ89-0011-R5a-SM-4V6GM 34.0
GTEX-X261-0011-R5A-SM-3NMB4 32.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 31.8
GTEX-11WQC-0011-R5a-SM-5BC74 31.7
GTEX-144GO-0011-R5a-SM-5PNUR 31.7
GTEX-X4XX-0011-R5A-SM-46MWN 31.7
GTEX-T2IS-0011-R5A-SM-32QP4 31.6
GTEX-ZV68-0011-R5a-SM-4YCDW 30.7
GTEX-13112-0011-R5b-SM-5DUV8 30.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 30.1
GTEX-144GL-0011-R5b-SM-5PNUJ 30.0
GTEX-PVOW-0011-R5A-SM-32PL7 29.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 29.8
GTEX-12WSH-0011-R5b-SM-5P9F3 29.3
GTEX-OXRN-0011-R5A-SM-2I5EF 28.6
GTEX-QMR6-0011-R5A-SM-32PKT 28.3
GTEX-13FHP-0011-R5b-SM-5LZY2 27.5
GTEX-XMD1-0011-R5A-SM-4AT47 27.4
GTEX-NPJ7-0011-R5a-SM-33HBK 27.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 26.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 26.2
GTEX-ZVT3-0011-R5a-SM-51MSI 25.3
GTEX-13CF2-0011-R5a-SM-5LZWS 22.2
GTEX-1445S-0011-R5a-SM-5PNUS 21.2
GTEX-139TS-0011-R5b-SM-5J2MZ 20.8
GTEX-11UD1-0011-R5b-SM-5P9FP 20.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 20.4
GTEX-1477Z-0011-R5b-SM-5PNUO 19.4
GTEX-145MG-0011-R5b-SM-5S2VU 17.9
GTEX-S7PM-0011-R5A-SM-3NM8G 17.5
GTEX-13NZA-0011-R5b-SM-5KM4K 13.6
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

58.3

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 58.3
FF:10379-105H1 89 years, female 70.3
FF:10164-103B2 76 years, female 46.3

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