Tissue expression of PTPN2 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	21.6	TPM
GTEx:	5.5	RPKM
FANTOM5:	25.9	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Medium
Peripheral nerve:	Not detected
Chondrocytes:	Not available

Antibody staining	Antibody HPA015004	Antibody HPA046176
Adipocytes	Not detected	Not detected
Fibroblasts	Medium	Not detected
Peripheral nerve	Not detected	Not detected
Chondrocytes	Not detected

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Low
Peripheral nerve:	Medium

Antibody staining	Antibody HPA015004	Antibody HPA046176
Adipocytes	Not detected	Not detected
Fibroblasts	Low	Not detected
Peripheral nerve	Medium	Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	21.6

Female, age 80

Sample 1
TPM: 14.8

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 9.8

Female, age 57

Sample 3
TPM: 10.3

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 38.5

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 35.0

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	5.5

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 5.0

Samples: 350

Max RPKM: 11.1
Min RPKM: 3
Std RPKM: 1.1
Median RPKM: 4.7

GTEX-ZYFD-0226-SM-5NQ86

11.1

GTEX-ZAJG-0226-SM-5HL81

9.5

GTEX-U8XE-0426-SM-3DB91

8.7

GTEX-T5JW-1726-SM-3GADN

8.3

GTEX-144GM-1926-SM-5LUAN

8.2

GTEX-146FH-0226-SM-5QGPQ

8.1

GTEX-Y3IK-2526-SM-4WWDM

8.1

GTEX-X88G-0226-SM-4GIE4

8.0

Show all

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 6.3

Samples: 227

Max RPKM: 14.6
Min RPKM: 2.9
Std RPKM: 2.2
Median RPKM: 5.9

GTEX-13PVQ-2226-SM-5L3G9

14.6

GTEX-Y114-1326-SM-4TT9A

14.5

GTEX-ZAJG-1626-SM-5HL7I

14.0

GTEX-ZV7C-0826-SM-59HK8

13.9

GTEX-13OVH-1126-SM-5K7YP

13.5

GTEX-13QBU-1326-SM-5LU4K

13.5

GTEX-13U4I-1726-SM-5J1MF

13.2

GTEX-12WSK-1026-SM-5CVNR

12.3

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	25.9

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 25.9

FF:10010-101C1

65,65,76 years, mixed

25.9