Fields »
ABOUT
HELP
BLOG
LPCAT4

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:13.1TPM
GTEx:21.5RPKM
FANTOM5:26.3Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA030719

  

Adipocytes

 Not detected  

Fibroblasts

 Not detected  

Peripheral nerve

 Not detected  
    
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Low
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA030719

  

Adipocytes

 Not detected  

Chondrocytes

 Low  

Fibroblasts

 Not detected  

Peripheral nerve

 Not detected  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

13.1
N/A Female, age 80
Sample 1
TPM: 9.5
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 7.6
N/A Female, age 57
Sample 3
TPM: 7.3
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 26.2
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 14.9
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

21.5

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 21.1
Samples: 350

Max RPKM: 48.2
Min RPKM: 4.1
Std RPKM: 8.1
Median RPKM: 20.1
GTEX-13PDP-0226-SM-5K7W9 48.2
GTEX-13NZ8-0926-SM-5MR3U 47.2
GTEX-12WSB-0226-SM-5GCOR 45.7
GTEX-13N2G-2726-SM-5J1MG 42.8
GTEX-WVJS-0226-SM-4MVOU 42.8
GTEX-11EQ8-0226-SM-5EQ5G 42.4
GTEX-14C5O-0226-SM-5SI6O 42.0
GTEX-OIZH-0226-SM-2YUMH 41.7
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 22.1
Samples: 227

Max RPKM: 95.6
Min RPKM: 4.8
Std RPKM: 11.6
Median RPKM: 20.1
GTEX-13PDP-1226-SM-5K7TW 95.6
GTEX-14A6H-1026-SM-5SIAZ 66.0
GTEX-13NYS-0726-SM-5J1OR 63.2
GTEX-13S86-0926-SM-5SI6I 55.7
GTEX-1192X-1526-SM-5H11I 54.0
GTEX-13NZ9-2026-SM-5KM1U 52.9
GTEX-ZAB5-1126-SM-5Q5AD 50.7
GTEX-13VXU-1026-SM-5KLZE 50.0
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

26.3

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 26.3
FF:10010-101C1 65,65,76 years, mixed 26.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.