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Gene name

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Subclass

Chromosome

External id

In atlas

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Method

Validation

Method

Validation

Method

Validation

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Searches

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Cell type

Expression

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Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

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Score

Score

Score

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ST8SIA3
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    TISSUE

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    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:18.0RPKM

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Medium
 

Antibody staining

Antibody HPA063398

 

Glial cells

Not detected  

Neuronal cells

Medium  
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

18.0

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 18.0
Samples: 117

Max RPKM: 85.1
Min RPKM: 1.2
Std RPKM: 12.3
Median RPKM: 17
GTEX-T2IS-0011-R5A-SM-32QP4 85.1
GTEX-13X6J-0011-R5b-SM-5PNWT 43.1
GTEX-131YS-0011-R5b-SM-5K7YB 41.1
GTEX-WHSE-0011-R5A-SM-3P5ZO 38.8
GTEX-PVOW-0011-R5A-SM-32PL7 38.2
GTEX-12WSC-0011-R5b-SM-5CVNS 37.5
GTEX-145MH-0011-R5a-SM-5P9JT 37.0
GTEX-1399T-0011-R5b-SM-5IJDK 36.6
GTEX-S7SE-0011-R5A-SM-2XCDA 36.5
GTEX-13G51-0011-R5a-SM-5L3EB 35.0
GTEX-WZTO-0011-R5B-SM-3NMC5 34.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 33.5
GTEX-1313W-0011-R5b-SM-5L3EP 33.1
GTEX-WVLH-0011-R5A-SM-3MJFW 32.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 32.2
GTEX-P44H-0011-R5A-SM-2XCEX 32.2
GTEX-13VXU-0011-R5a-SM-5O9D7 31.3
GTEX-N7MS-0011-R5a-SM-2HMK8 31.0
GTEX-WL46-0011-R5A-SM-3LK6V 29.9
GTEX-11OF3-0011-R5a-SM-57WB4 28.7
GTEX-T6MN-0011-R5A-SM-32QPD 28.6
GTEX-14ABY-0011-R5b-SM-5SI7B 27.5
GTEX-ZUA1-0011-R5b-SM-51MTG 27.4
GTEX-13FXS-0011-R5b-SM-5LZYE 27.3
GTEX-Z93S-0011-R5b-SM-4RGNI 27.0
GTEX-13O3O-0011-R5b-SM-5KM44 26.7
GTEX-13SLX-0011-R5a-SM-5O9BV 26.5
GTEX-11NV4-0011-R5a-SM-5NQ88 25.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 25.5
GTEX-145LS-0011-R5a-SM-5SI65 25.5
GTEX-QVJO-0011-R5A-SM-2S1QM 25.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 25.2
GTEX-WWYW-0011-R5A-SM-3NB3E 25.0
GTEX-13OVL-0011-R5b-SM-5L3FU 24.5
GTEX-T5JC-0011-R5A-SM-32PLK 24.4
GTEX-12WSF-0011-R5a-SM-5HL8K 24.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 23.7
GTEX-R55E-0011-R5A-SM-2TC5N 23.4
GTEX-13OW7-0011-R5b-SM-5O9DM 21.7
GTEX-11H98-0011-R5b-SM-57WCF 21.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 21.1
GTEX-11GSP-0011-R5a-SM-57WBE 20.8
GTEX-13FLW-0011-R5a-SM-5LZX6 20.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 20.2
GTEX-14BIM-0011-R5b-SM-5S2RM 20.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 19.9
GTEX-UTHO-0011-R5A-SM-3GIJD 19.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 19.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 19.4
GTEX-TSE9-0011-R5A-SM-3DB7J 19.3
GTEX-13X6K-0011-R5b-SM-5PNUE 19.1
GTEX-12WSD-0011-R5b-SM-5CVNG 18.2
GTEX-139TT-0011-R5b-SM-5K7W8 18.2
GTEX-13OW6-0011-R5a-SM-5O9BK 18.2
GTEX-RU72-0011-R5A-SM-2TF6U 18.1
GTEX-RVPU-0011-R5A-SM-2XCAD 17.7
GTEX-13S7M-0011-R5b-SM-5P9HS 17.3
GTEX-N7MT-0011-R5a-SM-2I3G6 17.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 17.0
GTEX-X585-0011-R5A-SM-46MVI 16.8
GTEX-13CZV-0011-R5a-SM-5K7XA 16.3
GTEX-14BIN-0011-R5b-SM-5SI78 16.0
GTEX-ZE7O-0011-R5a-SM-57WBO 15.6
GTEX-12ZZX-0011-R5a-SM-5HL89 15.2
GTEX-13NYB-0011-R5a-SM-5MR45 15.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 14.5
GTEX-NL4W-0011-R5a-SM-2I3GD 14.0
GTEX-RVPV-0011-R5A-SM-2TF69 13.6
GTEX-13OVH-0011-R5b-SM-5KM4L 13.4
GTEX-YFC4-0011-R5a-SM-4RGLR 13.2
GTEX-13FLV-0011-R5a-SM-5LZWT 12.7
GTEX-XOTO-0011-R5A-SM-4B657 12.0
GTEX-13X6I-0011-R5a-SM-5PNWW 11.6
GTEX-13OW5-0011-R5b-SM-5L3FR 11.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 11.4
GTEX-132Q8-0011-R5a-SM-5IJDM 11.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 11.1
GTEX-OHPN-0011-R5A-SM-2I5FF 10.8
GTEX-13JUV-0011-R5a-SM-5LZY5 10.5
GTEX-NL3H-0011-R5a-SM-2I3GB 10.2
GTEX-QMR6-0011-R5A-SM-32PKT 10.1
GTEX-ZXG5-0011-R5b-SM-57WBN 10.0
GTEX-12WSB-0011-R5b-SM-5GU67 9.8
GTEX-OXRN-0011-R5A-SM-2I5EF 9.8
GTEX-YJ89-0011-R5a-SM-4V6GM 9.5
GTEX-13NYS-0011-R5a-SM-5MR4D 8.8
GTEX-13JVG-0011-R5a-SM-5MR4O 8.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 8.0
GTEX-144GL-0011-R5b-SM-5PNUJ 7.8
GTEX-11WQC-0011-R5a-SM-5BC74 7.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 7.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 7.5
GTEX-XMD1-0011-R5A-SM-4AT47 7.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 7.0
GTEX-144GO-0011-R5a-SM-5PNUR 6.6
GTEX-13112-0011-R5b-SM-5DUV8 6.0
GTEX-13CIG-0011-R5b-SM-5L3F2 5.9
GTEX-ZV68-0011-R5a-SM-4YCDW 5.4
GTEX-13FHP-0011-R5b-SM-5LZY2 5.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 5.3
GTEX-ZVT3-0011-R5a-SM-51MSI 5.3
GTEX-X4XX-0011-R5A-SM-46MWN 5.2
GTEX-NPJ7-0011-R5a-SM-33HBK 4.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 4.6
GTEX-12WSA-0011-R5b-SM-5GU5I 4.2
GTEX-139TS-0011-R5b-SM-5J2MZ 3.9
GTEX-X261-0011-R5A-SM-3NMB4 3.8
GTEX-12WSH-0011-R5b-SM-5P9F3 3.5
GTEX-1477Z-0011-R5b-SM-5PNUO 3.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 3.3
GTEX-13CF2-0011-R5a-SM-5LZWS 3.2
GTEX-1445S-0011-R5a-SM-5PNUS 3.0
GTEX-S7PM-0011-R5A-SM-3NM8G 2.7
GTEX-11UD1-0011-R5b-SM-5P9FP 1.9
GTEX-13NZA-0011-R5b-SM-5KM4K 1.8
GTEX-145MG-0011-R5b-SM-5S2VU 1.8
GTEX-139T8-0011-R5b-SM-5J1MO 1.2
Show all

CAUDATE - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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