We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
PUF60
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:8.7TPM
GTEx:27.0RPKM
FANTOM5:18.3Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Glandular cells:Medium
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA052096

 

Antibody HPA059714

 

Adipocytes

Not detected   Medium  

Glandular cells

Not detected   Medium  

Myoepithelial cells

Not detected   Medium  
   
   
   

BREAST - HPA RNA-seq

Average TPM

8.7

overview Female, age 52
Sample 1
TPM: 14.3
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 9.0
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 9.7
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 1.9
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

27.0

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 27.0
Samples: 214

Max RPKM: 46.9
Min RPKM: 15.1
Std RPKM: 5.3
Median RPKM: 26.4
GTEX-14ABY-2126-SM-5QGQZ 46.9
GTEX-14AS3-1626-SM-5S2OY 43.7
GTEX-11TT1-2126-SM-5GU5Y 41.5
GTEX-11P82-1326-SM-5HL62 41.2
GTEX-T2IS-1526-SM-32QPR 40.9
GTEX-ZTTD-1026-SM-51MRD 39.9
GTEX-11TUW-1826-SM-5BC5D 39.7
GTEX-T5JW-2026-SM-4DM63 38.6
GTEX-13S86-1226-SM-5S2OA 38.1
GTEX-1399U-1826-SM-5PNZ1 38.0
GTEX-13O3O-0826-SM-5K7WE 37.9
GTEX-13PVQ-1026-SM-5KM3M 37.5
GTEX-11PRG-0826-SM-5EQ6A 37.4
GTEX-13NZ9-1026-SM-5MR5K 36.9
GTEX-X4XY-0926-SM-4E3JD 35.8
GTEX-XOT4-0726-SM-4GIAW 35.8
GTEX-11WQK-2426-SM-5GU5C 35.1
GTEX-ZY6K-1626-SM-5GZWV 35.1
GTEX-U8XE-0826-SM-4E3J1 34.8
GTEX-XUZC-1626-SM-4BRVP 34.5
GTEX-139TU-0626-SM-5KM3X 34.4
GTEX-11WQC-1726-SM-5GU4W 34.0
GTEX-VUSG-2226-SM-4KKZO 33.8
GTEX-11EMC-2026-SM-5A5JV 33.1
GTEX-SIU7-1626-SM-4BRUK 32.9
GTEX-XYKS-1326-SM-4BRUN 32.9
GTEX-ZLV1-1426-SM-4WWES 32.8
GTEX-Y3IK-2326-SM-4WWDT 32.6
GTEX-Y5LM-1726-SM-4VDSX 32.6
GTEX-Y114-2026-SM-4TT7L 32.5
GTEX-133LE-1726-SM-5K7VQ 32.3
GTEX-131YS-0626-SM-5EGKL 32.1
GTEX-ZVT2-1826-SM-5NQ8W 32.1
GTEX-11GS4-2126-SM-5A5KR 32.0
GTEX-13D11-1026-SM-5IJFB 31.9
GTEX-13NZB-2126-SM-5MR4Y 31.7
GTEX-13PL6-2926-SM-5L3I2 31.7
GTEX-ZC5H-2626-SM-5J2MG 31.7
GTEX-131XW-0726-SM-5EGK3 31.6
GTEX-11DZ1-0326-SM-5N9BN 31.5
GTEX-X15G-1626-SM-3NMB3 31.5
GTEX-REY6-2426-SM-48FF5 31.3
GTEX-X261-0626-SM-3NMD9 31.1
GTEX-ZLFU-2126-SM-4WWEV 31.1
GTEX-ZVTK-0326-SM-51MRR 30.9
GTEX-T6MN-0726-SM-32PML 30.8
GTEX-145LT-0726-SM-5S2VM 30.7
GTEX-QEG5-0726-SM-4R1JQ 30.7
GTEX-13CF2-2026-SM-5K7VI 30.6
GTEX-QEL4-2126-SM-447AE 30.4
GTEX-R3RS-0626-SM-48FE1 30.4
GTEX-Q2AG-0326-SM-48U1O 30.3
GTEX-13FTY-2226-SM-5J1ND 30.2
GTEX-WYBS-0926-SM-3NM94 30.1
GTEX-YFC4-1426-SM-5IFJG 30.1
GTEX-13W3W-1226-SM-5LU4H 30.0
GTEX-X4EP-2926-SM-3P5YQ 29.9
GTEX-13CF3-2126-SM-5IFJP 29.8
GTEX-SE5C-2126-SM-4BRUJ 29.8
GTEX-WXYG-2226-SM-4E3IM 29.8
GTEX-XUW1-2326-SM-4BOO5 29.6
GTEX-ZAJG-0626-SM-5HL8X 29.6
GTEX-ZQUD-1926-SM-51MSA 29.5
GTEX-12WSN-1326-SM-5GCNT 29.3
GTEX-S4UY-0726-SM-4AD6X 29.2
GTEX-13N11-1726-SM-5J1OJ 29.1
GTEX-S341-1526-SM-4AD6K 29.1
GTEX-U3ZH-1426-SM-4DXSR 29.1
GTEX-11I78-2226-SM-5PNYA 29.0
GTEX-1211K-1926-SM-5EQLB 29.0
GTEX-RUSQ-2026-SM-4GIAK 29.0
GTEX-11P7K-0726-SM-5EGKX 28.9
GTEX-WYVS-1726-SM-3NMAY 28.9
GTEX-ZT9W-2026-SM-51MRA 28.8
GTEX-WOFL-0826-SM-3MJG1 28.6
GTEX-ZDYS-1126-SM-5K7UB 28.5
GTEX-ZXES-0826-SM-5E43C 28.5
GTEX-13QIC-2326-SM-5LU5N 28.4
GTEX-ZF29-1926-SM-5S2P1 28.4
GTEX-12ZZX-1126-SM-5EGKB 28.2
GTEX-ZF2S-2026-SM-5E461 28.0
GTEX-ZU9S-1926-SM-5NQBP 28.0
GTEX-13O61-1826-SM-5KM4I 27.7
GTEX-ZYWO-2326-SM-5GZY4 27.7
GTEX-11EQ9-1826-SM-5Q5AJ 27.5
GTEX-S32W-2026-SM-4AD6E 27.4
GTEX-XUJ4-1926-SM-4BOOV 27.4
GTEX-145MO-0826-SM-5NQBL 27.3
GTEX-UJHI-1426-SM-3DB9C 27.3
GTEX-Y5V5-2126-SM-4WWFO 27.3
GTEX-S4Q7-1126-SM-4AD6R 27.2
GTEX-ZV7C-1826-SM-5NQ83 27.2
GTEX-1313W-0826-SM-5EQ4T 27.1
GTEX-13NZ8-0126-SM-5IJCT 27.1
GTEX-XQ3S-1326-SM-4BOPQ 27.1
GTEX-147F4-2826-SM-5NQBN 27.0
GTEX-XGQ4-0926-SM-4AT4U 27.0
GTEX-144GM-0926-SM-5O994 26.9
GTEX-QDT8-0626-SM-48TYW 26.8
GTEX-WRHU-0326-SM-3MJFY 26.7
GTEX-XQ8I-2426-SM-4WAXY 26.7
GTEX-XV7Q-2326-SM-4BRVZ 26.7
GTEX-ZVT4-1026-SM-57WC4 26.7
GTEX-Y111-2026-SM-4SOJA 26.6
GTEX-R55D-0826-SM-48FEA 26.5
GTEX-T6MO-0326-SM-32QOK 26.5
GTEX-1192X-2326-SM-5987X 26.4
GTEX-ZA64-1526-SM-5CVMD 26.4
GTEX-TKQ1-0226-SM-33HB5 26.3
GTEX-ZVZQ-0826-SM-51MRF 26.3
GTEX-S4P3-1326-SM-4AD6V 26.0
GTEX-Y8LW-1626-SM-5IFHX 26.0
GTEX-13OW8-0226-SM-5K7UP 25.9
GTEX-YEC3-1026-SM-5IFI5 25.9
GTEX-RU72-0626-SM-46MUI 25.8
GTEX-YFCO-1826-SM-4W1YH 25.8
GTEX-Y5V6-2126-SM-4WWFX 25.7
GTEX-1269C-2426-SM-5FQSN 25.5
GTEX-ZZ64-1226-SM-5E43R 25.5
GTEX-PSDG-1626-SM-48TCQ 25.4
GTEX-ZTX8-1226-SM-4YCE9 25.4
GTEX-UPK5-2326-SM-3P5Z8 25.3
GTEX-117YX-1426-SM-5H12H 25.2
GTEX-ZYFC-0826-SM-5E44K 25.2
GTEX-13113-1726-SM-5GCOO 25.1
GTEX-111YS-1926-SM-5GICC 25.0
GTEX-1117F-2826-SM-5GZXL 24.9
GTEX-QVJO-1826-SM-447C9 24.9
GTEX-U3ZN-1926-SM-4DXSG 24.9
GTEX-YB5K-1626-SM-5IFIN 24.9
GTEX-ZVE2-1226-SM-5NQ8R 24.9
GTEX-ZZPU-0626-SM-5E43T 24.9
GTEX-11EI6-0626-SM-5985T 24.6
GTEX-11EM3-1326-SM-5N9C6 24.6
GTEX-Y9LG-1426-SM-5IFJZ 24.5
GTEX-TML8-1226-SM-32QON 24.4
GTEX-XMD2-0926-SM-4WWEF 24.4
GTEX-ZV6S-1826-SM-5NQ8D 24.4
GTEX-1122O-1226-SM-5H113 24.3
GTEX-RWS6-1926-SM-47JXY 24.3
GTEX-13N1W-0626-SM-5MR4U 24.2
GTEX-XBED-1626-SM-47JYN 24.2
GTEX-S7SE-0826-SM-4AT4D 24.1
GTEX-11LCK-2426-SM-5HL5F 24.0
GTEX-11ZTT-2326-SM-5EQLG 24.0
GTEX-13OW5-2226-SM-5L3HC 24.0
GTEX-ZAB4-2526-SM-5HL8M 23.9
GTEX-ZEX8-2226-SM-57WC6 23.9
GTEX-WI4N-1426-SM-3LK7H 23.8
GTEX-YB5E-1726-SM-5IFJ3 23.8
GTEX-WYJK-1326-SM-3NB2T 23.7
GTEX-11NV4-2026-SM-5N9DG 23.6
GTEX-13FHO-0826-SM-5L3E8 23.6
GTEX-146FH-0826-SM-5SI8T 23.6
GTEX-Y8E4-1626-SM-5S2MW 23.6
GTEX-WY7C-2726-SM-3NB3P 23.5
GTEX-12WSM-1726-SM-5BC6J 23.4
GTEX-13O3Q-2226-SM-5KM4O 23.4
GTEX-TMMY-0726-SM-33HBE 23.4
GTEX-ZUA1-1526-SM-59HLS 23.4
GTEX-12BJ1-1826-SM-5HL9N 23.3
GTEX-ZYT6-0126-SM-5E45J 23.2
GTEX-VJWN-0726-SM-3GIJ8 23.1
GTEX-Y3I4-1526-SM-4TT7K 23.1
GTEX-144GL-2026-SM-5LU3O 22.9
GTEX-139T8-0826-SM-5L3DE 22.7
GTEX-13FTW-1426-SM-5LZWZ 22.7
GTEX-QMRM-1626-SM-4R1KV 22.5
GTEX-11DXW-0626-SM-5N9ER 22.4
GTEX-11NSD-0926-SM-5N9DR 22.4
GTEX-132AR-0826-SM-5EGK6 22.4
GTEX-ZF3C-2326-SM-5S2MZ 22.4
GTEX-11P81-1926-SM-5BC53 22.3
GTEX-11ZUS-0826-SM-5FQUY 22.3
GTEX-R53T-1526-SM-48FEK 22.3
GTEX-S33H-0326-SM-4AD6N 22.3
GTEX-12WSK-2226-SM-5GCO5 22.2
GTEX-T2YK-2226-SM-32QPT 22.2
GTEX-11GSO-1926-SM-5A5K3 22.1
GTEX-14E6E-1326-SM-5S2NR 22.1
GTEX-ZDXO-0126-SM-5S2ND 22.1
GTEX-12WSB-0626-SM-59HJO 22.0
GTEX-ZPIC-1126-SM-5BC7F 22.0
GTEX-11OF3-1926-SM-59889 21.8
GTEX-139T6-1626-SM-5PNYZ 21.8
GTEX-TKQ2-1826-SM-33HB2 21.8
GTEX-ZQG8-0726-SM-5P9H9 21.8
GTEX-11O72-2126-SM-5N9FO 21.6
GTEX-132Q8-1426-SM-5EGK7 21.6
GTEX-13FTX-1126-SM-5N9EN 21.6
GTEX-ZWKS-2826-SM-5NQ74 21.4
GTEX-117XS-1926-SM-5GICO 21.3
GTEX-13O3P-0826-SM-5L3DH 21.3
GTEX-145MN-1926-SM-5SIAI 21.2
GTEX-11DXZ-1926-SM-5GZZL 21.1
GTEX-14753-2426-SM-5LU8U 21.0
GTEX-132NY-0826-SM-5K7Y7 20.9
GTEX-ZYW4-0826-SM-5GIDG 20.7
GTEX-11DXY-2326-SM-5GICW 20.5
GTEX-145ME-1526-SM-5Q5F2 20.5
GTEX-12KS4-0126-SM-5Q5A5 20.4
GTEX-YJ8O-2226-SM-5IFHW 20.3
GTEX-ZDTT-2126-SM-5S2OJ 20.3
GTEX-13W46-0826-SM-5LU3H 20.2
GTEX-R55F-1726-SM-2TF4R 19.9
GTEX-U412-1826-SM-4DXTJ 19.7
GTEX-11ONC-2126-SM-5HL6E 19.4
GTEX-T5JC-2126-SM-32PMO 19.2
GTEX-XMD1-0826-SM-4AT52 18.4
GTEX-XMK1-1126-SM-4IHJ8 18.4
GTEX-1314G-1226-SM-5BC6D 18.3
GTEX-UTHO-1026-SM-3GAF7 16.5
GTEX-W5X1-2326-SM-3GIL6 15.5
GTEX-WFON-1826-SM-3GILG 15.1
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

18.3

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 18.3
FF:10080-102A8 77 years, female 18.3

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.