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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:7.8TPM
GTEx:11.7RPKM
FANTOM5:10.2Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not available
Fibroblasts:Not detected
Peripheral nerve:Not available
 
 

Antibody staining

Antibody HPA023557

  

Antibody CAB015463

  

Antibody CAB022081

  

Adipocytes

 Low   Not detected   Low  

Chondrocytes

 Not detected  

Fibroblasts

 Medium   Not detected   Medium  

Peripheral nerve

 Low   Low  
        
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA023557

  

Antibody CAB015463

  

Antibody CAB022081

  

Adipocytes

 Low   Not detected   Low  

Fibroblasts

 Medium   Not detected   Not detected  

Peripheral nerve

 Low   Not detected   Low  
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

7.8
N/A Female, age 80
Sample 1
TPM: 15.1
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 7.8
N/A Female, age 57
Sample 3
TPM: 7.6
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 5.1
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 3.3
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

11.7

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 11.5
Samples: 350

Max RPKM: 23.6
Min RPKM: 3
Std RPKM: 2.7
Median RPKM: 11.6
GTEX-11EQ8-0226-SM-5EQ5G 23.6
GTEX-NPJ8-0226-SM-48TBN 19.8
GTEX-13NZ8-0926-SM-5MR3U 18.3
GTEX-W5WG-2526-SM-4SOJ2 18.3
GTEX-XGQ4-2226-SM-4AT4Y 18.2
GTEX-11P81-2426-SM-5GU65 17.7
GTEX-N7MS-0326-SM-4E3K2 17.6
GTEX-XMD2-0226-SM-4WWEE 17.4
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 11.9
Samples: 227

Max RPKM: 19.9
Min RPKM: 5.3
Std RPKM: 2.5
Median RPKM: 11.8
GTEX-13IVO-2426-SM-5K7V9 19.9
GTEX-WWTW-1326-SM-4MVNT 19.3
GTEX-13PDP-1226-SM-5K7TW 18.5
GTEX-13S86-0926-SM-5SI6I 17.7
GTEX-13NYS-0726-SM-5J1OR 17.6
GTEX-131XE-2026-SM-5LZW1 17.3
GTEX-13NZ9-2026-SM-5KM1U 17.1
GTEX-ZAJG-1626-SM-5HL7I 17.1
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

10.2

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 10.2
FF:10010-101C1 65,65,76 years, mixed 10.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.