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NPLOC4

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:41.4TPM
GTEx:13.3RPKM
FANTOM5:54.4Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
 

Antibody staining

Antibody HPA021560

  

Antibody HPA023295

  

Adipocytes

 Not detected   Low  

Fibroblasts

 Not detected   Low  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Medium
 

Antibody staining

Antibody HPA021560

  

Antibody HPA023295

  

Adipocytes

 Not detected   Low  

Fibroblasts

 Medium   High  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

41.4
N/A Female, age 80
Sample 1
TPM: 51.1
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 31.7
N/A Female, age 57
Sample 3
TPM: 29.7
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 46.8
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 47.9
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

13.3

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 14.2
Samples: 350

Max RPKM: 26.1
Min RPKM: 5.7
Std RPKM: 3.1
Median RPKM: 13.9
GTEX-13O1R-0226-SM-5K7U5 26.1
GTEX-T5JW-1726-SM-3GADN 23.4
GTEX-QLQW-1226-SM-2S1Q9 22.8
GTEX-145ME-1926-SM-5SI9S 22.6
GTEX-X15G-2326-SM-4PQZS 22.1
GTEX-PX3G-0226-SM-3NB2C 21.2
GTEX-R55G-2426-SM-2TC5I 21.0
GTEX-TKQ1-1126-SM-4GIAZ 20.6
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 11.9
Samples: 227

Max RPKM: 20.4
Min RPKM: 5.7
Std RPKM: 2.8
Median RPKM: 11.5
GTEX-1122O-0926-SM-5N9C9 20.4
GTEX-131XG-0126-SM-5K7UJ 19.3
GTEX-ZF29-0826-SM-5S2NP 19.2
GTEX-11I78-0226-SM-5HL6R 18.5
GTEX-ZPCL-1026-SM-5GCOX 18.3
GTEX-Y114-1326-SM-4TT9A 18.1
GTEX-12WSG-0426-SM-5FQSE 17.5
GTEX-U8XE-1926-SM-3DB98 17.5
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

54.4

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 54.4
FF:10010-101C1 65,65,76 years, mixed 54.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.